Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7245 | 21958;21959;21960 | chr2:178723274;178723273;178723272 | chr2:179588001;179588000;179587999 |
N2AB | 6928 | 21007;21008;21009 | chr2:178723274;178723273;178723272 | chr2:179588001;179588000;179587999 |
N2A | 6001 | 18226;18227;18228 | chr2:178723274;178723273;178723272 | chr2:179588001;179588000;179587999 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.001 | N | 0.222 | 0.094 | 0.177238962908 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4085 | ambiguous | 0.424 | ambiguous | -0.231 | Destabilizing | 0.116 | N | 0.321 | neutral | None | None | None | None | N |
K/C | 0.7196 | likely_pathogenic | 0.7304 | pathogenic | -0.268 | Destabilizing | 0.944 | D | 0.434 | neutral | None | None | None | None | N |
K/D | 0.5266 | ambiguous | 0.5546 | ambiguous | 0.137 | Stabilizing | 0.241 | N | 0.327 | neutral | None | None | None | None | N |
K/E | 0.1757 | likely_benign | 0.1824 | benign | 0.155 | Stabilizing | 0.001 | N | 0.173 | neutral | N | 0.435694342 | None | None | N |
K/F | 0.772 | likely_pathogenic | 0.7853 | pathogenic | -0.427 | Destabilizing | 0.818 | D | 0.387 | neutral | None | None | None | None | N |
K/G | 0.4721 | ambiguous | 0.4891 | ambiguous | -0.464 | Destabilizing | 0.388 | N | 0.382 | neutral | None | None | None | None | N |
K/H | 0.2873 | likely_benign | 0.3042 | benign | -0.892 | Destabilizing | 0.818 | D | 0.301 | neutral | None | None | None | None | N |
K/I | 0.4333 | ambiguous | 0.452 | ambiguous | 0.313 | Stabilizing | 0.527 | D | 0.403 | neutral | None | None | None | None | N |
K/L | 0.4374 | ambiguous | 0.4614 | ambiguous | 0.313 | Stabilizing | 0.241 | N | 0.415 | neutral | None | None | None | None | N |
K/M | 0.2817 | likely_benign | 0.3011 | benign | 0.326 | Stabilizing | 0.928 | D | 0.295 | neutral | N | 0.513544624 | None | None | N |
K/N | 0.3264 | likely_benign | 0.3419 | ambiguous | 0.143 | Stabilizing | 0.015 | N | 0.297 | neutral | N | 0.496265585 | None | None | N |
K/P | 0.9208 | likely_pathogenic | 0.9149 | pathogenic | 0.161 | Stabilizing | 0.818 | D | 0.306 | neutral | None | None | None | None | N |
K/Q | 0.1248 | likely_benign | 0.1322 | benign | -0.089 | Destabilizing | 0.193 | N | 0.363 | neutral | N | 0.429232516 | None | None | N |
K/R | 0.0852 | likely_benign | 0.0877 | benign | -0.134 | Destabilizing | 0.001 | N | 0.349 | neutral | N | 0.498132454 | None | None | N |
K/S | 0.3703 | ambiguous | 0.3852 | ambiguous | -0.459 | Destabilizing | 0.241 | N | 0.299 | neutral | None | None | None | None | N |
K/T | 0.2098 | likely_benign | 0.2254 | benign | -0.276 | Destabilizing | 0.001 | N | 0.222 | neutral | N | 0.497785738 | None | None | N |
K/V | 0.4051 | ambiguous | 0.4223 | ambiguous | 0.161 | Stabilizing | 0.241 | N | 0.399 | neutral | None | None | None | None | N |
K/W | 0.7885 | likely_pathogenic | 0.7941 | pathogenic | -0.349 | Destabilizing | 0.981 | D | 0.532 | neutral | None | None | None | None | N |
K/Y | 0.5949 | likely_pathogenic | 0.6094 | pathogenic | 0.002 | Stabilizing | 0.818 | D | 0.377 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.