Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7246 | 21961;21962;21963 | chr2:178723271;178723270;178723269 | chr2:179587998;179587997;179587996 |
N2AB | 6929 | 21010;21011;21012 | chr2:178723271;178723270;178723269 | chr2:179587998;179587997;179587996 |
N2A | 6002 | 18229;18230;18231 | chr2:178723271;178723270;178723269 | chr2:179587998;179587997;179587996 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1477073298 | -0.839 | 0.989 | N | 0.427 | 0.381 | 0.560757523052 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14758E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/F | rs1477073298 | -0.839 | 0.989 | N | 0.427 | 0.381 | 0.560757523052 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/F | rs1477073298 | -0.839 | 0.989 | N | 0.427 | 0.381 | 0.560757523052 | gnomAD-4.0.0 | 3.84442E-06 | None | None | None | None | N | None | 5.06637E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0756 | likely_benign | 0.0779 | benign | -0.754 | Destabilizing | 0.625 | D | 0.327 | neutral | N | 0.51333398 | None | None | N |
S/C | 0.1655 | likely_benign | 0.1688 | benign | -0.551 | Destabilizing | 0.997 | D | 0.386 | neutral | N | 0.471255609 | None | None | N |
S/D | 0.3896 | ambiguous | 0.433 | ambiguous | -0.467 | Destabilizing | 0.915 | D | 0.26 | neutral | None | None | None | None | N |
S/E | 0.5122 | ambiguous | 0.5484 | ambiguous | -0.44 | Destabilizing | 0.842 | D | 0.262 | neutral | None | None | None | None | N |
S/F | 0.2852 | likely_benign | 0.3215 | benign | -0.84 | Destabilizing | 0.989 | D | 0.427 | neutral | N | 0.47100212 | None | None | N |
S/G | 0.1057 | likely_benign | 0.1172 | benign | -1.036 | Destabilizing | 0.688 | D | 0.293 | neutral | None | None | None | None | N |
S/H | 0.3428 | ambiguous | 0.3797 | ambiguous | -1.466 | Destabilizing | 0.998 | D | 0.386 | neutral | None | None | None | None | N |
S/I | 0.233 | likely_benign | 0.2649 | benign | -0.103 | Destabilizing | 0.949 | D | 0.43 | neutral | None | None | None | None | N |
S/K | 0.5929 | likely_pathogenic | 0.6442 | pathogenic | -0.745 | Destabilizing | 0.842 | D | 0.266 | neutral | None | None | None | None | N |
S/L | 0.1277 | likely_benign | 0.1429 | benign | -0.103 | Destabilizing | 0.842 | D | 0.349 | neutral | None | None | None | None | N |
S/M | 0.2451 | likely_benign | 0.2695 | benign | 0.176 | Stabilizing | 0.998 | D | 0.39 | neutral | None | None | None | None | N |
S/N | 0.1195 | likely_benign | 0.1358 | benign | -0.826 | Destabilizing | 0.915 | D | 0.349 | neutral | None | None | None | None | N |
S/P | 0.0717 | likely_benign | 0.0743 | benign | -0.285 | Destabilizing | 0.002 | N | 0.144 | neutral | N | 0.407782596 | None | None | N |
S/Q | 0.4408 | ambiguous | 0.4763 | ambiguous | -0.925 | Destabilizing | 0.974 | D | 0.389 | neutral | None | None | None | None | N |
S/R | 0.5169 | ambiguous | 0.5677 | pathogenic | -0.67 | Destabilizing | 0.974 | D | 0.405 | neutral | None | None | None | None | N |
S/T | 0.0978 | likely_benign | 0.1037 | benign | -0.795 | Destabilizing | 0.051 | N | 0.133 | neutral | N | 0.447068916 | None | None | N |
S/V | 0.2263 | likely_benign | 0.2477 | benign | -0.285 | Destabilizing | 0.842 | D | 0.342 | neutral | None | None | None | None | N |
S/W | 0.4002 | ambiguous | 0.4552 | ambiguous | -0.842 | Destabilizing | 0.998 | D | 0.574 | neutral | None | None | None | None | N |
S/Y | 0.2047 | likely_benign | 0.2318 | benign | -0.566 | Destabilizing | 0.989 | D | 0.425 | neutral | N | 0.47100212 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.