Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7247 | 21964;21965;21966 | chr2:178723268;178723267;178723266 | chr2:179587995;179587994;179587993 |
N2AB | 6930 | 21013;21014;21015 | chr2:178723268;178723267;178723266 | chr2:179587995;179587994;179587993 |
N2A | 6003 | 18232;18233;18234 | chr2:178723268;178723267;178723266 | chr2:179587995;179587994;179587993 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | None | N | 0.175 | 0.079 | 0.107399877778 | gnomAD-4.0.0 | 6.84337E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99569E-07 | 0 | 0 |
I/T | None | None | 0.029 | N | 0.623 | 0.223 | 0.445614145163 | gnomAD-4.0.0 | 4.77582E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57785E-06 | 0 | 0 |
I/V | None | None | None | N | 0.175 | 0.07 | 0.178374595973 | gnomAD-4.0.0 | 6.84337E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99569E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6481 | likely_pathogenic | 0.6671 | pathogenic | -2.907 | Highly Destabilizing | None | N | 0.421 | neutral | None | None | None | None | N |
I/C | 0.8449 | likely_pathogenic | 0.8457 | pathogenic | -2.348 | Highly Destabilizing | 0.356 | N | 0.713 | prob.delet. | None | None | None | None | N |
I/D | 0.9832 | likely_pathogenic | 0.9835 | pathogenic | -3.089 | Highly Destabilizing | 0.356 | N | 0.754 | deleterious | None | None | None | None | N |
I/E | 0.9665 | likely_pathogenic | 0.9654 | pathogenic | -2.845 | Highly Destabilizing | 0.356 | N | 0.755 | deleterious | None | None | None | None | N |
I/F | 0.28 | likely_benign | 0.3302 | benign | -1.759 | Destabilizing | None | N | 0.397 | neutral | None | None | None | None | N |
I/G | 0.935 | likely_pathogenic | 0.9425 | pathogenic | -3.495 | Highly Destabilizing | 0.072 | N | 0.691 | prob.neutral | None | None | None | None | N |
I/H | 0.9387 | likely_pathogenic | 0.9379 | pathogenic | -2.827 | Highly Destabilizing | 0.864 | D | 0.725 | prob.delet. | None | None | None | None | N |
I/K | 0.9347 | likely_pathogenic | 0.9264 | pathogenic | -2.327 | Highly Destabilizing | 0.106 | N | 0.752 | deleterious | N | 0.491864625 | None | None | N |
I/L | 0.1298 | likely_benign | 0.1339 | benign | -1.189 | Destabilizing | None | N | 0.175 | neutral | N | 0.416417935 | None | None | N |
I/M | 0.1457 | likely_benign | 0.1545 | benign | -1.183 | Destabilizing | 0.171 | N | 0.665 | neutral | N | 0.48502777 | None | None | N |
I/N | 0.8571 | likely_pathogenic | 0.8438 | pathogenic | -2.682 | Highly Destabilizing | 0.628 | D | 0.759 | deleterious | None | None | None | None | N |
I/P | 0.9746 | likely_pathogenic | 0.9779 | pathogenic | -1.744 | Destabilizing | 0.356 | N | 0.757 | deleterious | None | None | None | None | N |
I/Q | 0.9314 | likely_pathogenic | 0.9311 | pathogenic | -2.528 | Highly Destabilizing | 0.628 | D | 0.758 | deleterious | None | None | None | None | N |
I/R | 0.8871 | likely_pathogenic | 0.8802 | pathogenic | -2.007 | Highly Destabilizing | 0.295 | N | 0.756 | deleterious | N | 0.503220931 | None | None | N |
I/S | 0.8072 | likely_pathogenic | 0.8004 | pathogenic | -3.46 | Highly Destabilizing | 0.038 | N | 0.646 | neutral | None | None | None | None | N |
I/T | 0.707 | likely_pathogenic | 0.6745 | pathogenic | -3.051 | Highly Destabilizing | 0.029 | N | 0.623 | neutral | N | 0.468645035 | None | None | N |
I/V | 0.075 | likely_benign | 0.0807 | benign | -1.744 | Destabilizing | None | N | 0.175 | neutral | N | 0.431403243 | None | None | N |
I/W | 0.9373 | likely_pathogenic | 0.9462 | pathogenic | -2.087 | Highly Destabilizing | 0.864 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/Y | 0.7956 | likely_pathogenic | 0.8218 | pathogenic | -1.865 | Destabilizing | 0.12 | N | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.