Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7248 | 21967;21968;21969 | chr2:178723265;178723264;178723263 | chr2:179587992;179587991;179587990 |
N2AB | 6931 | 21016;21017;21018 | chr2:178723265;178723264;178723263 | chr2:179587992;179587991;179587990 |
N2A | 6004 | 18235;18236;18237 | chr2:178723265;178723264;178723263 | chr2:179587992;179587991;179587990 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.007 | N | 0.353 | 0.183 | 0.334161072951 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3783 | ambiguous | 0.5562 | ambiguous | -1.502 | Destabilizing | 0.129 | N | 0.453 | neutral | None | None | None | None | N |
I/C | 0.664 | likely_pathogenic | 0.7637 | pathogenic | -0.831 | Destabilizing | 0.983 | D | 0.559 | neutral | None | None | None | None | N |
I/D | 0.767 | likely_pathogenic | 0.8666 | pathogenic | -1.047 | Destabilizing | 0.836 | D | 0.589 | neutral | None | None | None | None | N |
I/E | 0.6187 | likely_pathogenic | 0.7672 | pathogenic | -1.047 | Destabilizing | 0.418 | N | 0.534 | neutral | None | None | None | None | N |
I/F | 0.1291 | likely_benign | 0.1827 | benign | -1.005 | Destabilizing | 0.655 | D | 0.539 | neutral | N | 0.463338663 | None | None | N |
I/G | 0.6864 | likely_pathogenic | 0.8266 | pathogenic | -1.814 | Destabilizing | 0.593 | D | 0.539 | neutral | None | None | None | None | N |
I/H | 0.4013 | ambiguous | 0.5384 | ambiguous | -0.993 | Destabilizing | 0.983 | D | 0.571 | neutral | None | None | None | None | N |
I/K | 0.3379 | likely_benign | 0.4996 | ambiguous | -1.109 | Destabilizing | 0.01 | N | 0.471 | neutral | None | None | None | None | N |
I/L | 0.0984 | likely_benign | 0.1432 | benign | -0.721 | Destabilizing | 0.047 | N | 0.368 | neutral | N | 0.475543596 | None | None | N |
I/M | 0.1104 | likely_benign | 0.1538 | benign | -0.579 | Destabilizing | 0.047 | N | 0.386 | neutral | N | 0.508618807 | None | None | N |
I/N | 0.3118 | likely_benign | 0.4463 | ambiguous | -0.868 | Destabilizing | 0.794 | D | 0.595 | neutral | N | 0.487896818 | None | None | N |
I/P | 0.8917 | likely_pathogenic | 0.9288 | pathogenic | -0.951 | Destabilizing | 0.94 | D | 0.595 | neutral | None | None | None | None | N |
I/Q | 0.41 | ambiguous | 0.5684 | pathogenic | -1.037 | Destabilizing | 0.716 | D | 0.604 | neutral | None | None | None | None | N |
I/R | 0.2395 | likely_benign | 0.3702 | ambiguous | -0.499 | Destabilizing | 0.557 | D | 0.589 | neutral | None | None | None | None | N |
I/S | 0.3043 | likely_benign | 0.4395 | ambiguous | -1.422 | Destabilizing | 0.213 | N | 0.54 | neutral | N | 0.468790982 | None | None | N |
I/T | 0.1951 | likely_benign | 0.2967 | benign | -1.307 | Destabilizing | 0.007 | N | 0.353 | neutral | N | 0.400659048 | None | None | N |
I/V | 0.0711 | likely_benign | 0.0907 | benign | -0.951 | Destabilizing | 0.001 | N | 0.287 | neutral | N | 0.417303369 | None | None | N |
I/W | 0.7214 | likely_pathogenic | 0.8001 | pathogenic | -1.073 | Destabilizing | 0.983 | D | 0.594 | neutral | None | None | None | None | N |
I/Y | 0.4156 | ambiguous | 0.5087 | ambiguous | -0.873 | Destabilizing | 0.836 | D | 0.587 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.