Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7250 | 21973;21974;21975 | chr2:178723259;178723258;178723257 | chr2:179587986;179587985;179587984 |
N2AB | 6933 | 21022;21023;21024 | chr2:178723259;178723258;178723257 | chr2:179587986;179587985;179587984 |
N2A | 6006 | 18241;18242;18243 | chr2:178723259;178723258;178723257 | chr2:179587986;179587985;179587984 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs758430575 | -1.037 | 0.998 | N | 0.635 | 0.516 | 0.55563304408 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs758430575 | -1.037 | 0.998 | N | 0.635 | 0.516 | 0.55563304408 | gnomAD-4.0.0 | 1.59181E-06 | None | None | None | None | I | None | 0 | 2.28739E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5251 | ambiguous | 0.5686 | pathogenic | -0.805 | Destabilizing | 0.989 | D | 0.586 | neutral | N | 0.493823539 | None | None | I |
E/C | 0.9793 | likely_pathogenic | 0.9819 | pathogenic | -0.392 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/D | 0.6576 | likely_pathogenic | 0.6935 | pathogenic | -0.938 | Destabilizing | 0.994 | D | 0.537 | neutral | N | 0.491519361 | None | None | I |
E/F | 0.9684 | likely_pathogenic | 0.9748 | pathogenic | -0.3 | Destabilizing | 0.995 | D | 0.719 | prob.delet. | None | None | None | None | I |
E/G | 0.6276 | likely_pathogenic | 0.6656 | pathogenic | -1.141 | Destabilizing | 0.998 | D | 0.635 | neutral | N | 0.509663296 | None | None | I |
E/H | 0.8513 | likely_pathogenic | 0.8705 | pathogenic | -0.483 | Destabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | I |
E/I | 0.8323 | likely_pathogenic | 0.8746 | pathogenic | 0.098 | Stabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | I |
E/K | 0.5214 | ambiguous | 0.583 | pathogenic | -0.378 | Destabilizing | 0.978 | D | 0.551 | neutral | N | 0.513414991 | None | None | I |
E/L | 0.876 | likely_pathogenic | 0.9028 | pathogenic | 0.098 | Stabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | I |
E/M | 0.8665 | likely_pathogenic | 0.8941 | pathogenic | 0.459 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
E/N | 0.7961 | likely_pathogenic | 0.8174 | pathogenic | -0.867 | Destabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | I |
E/P | 0.9881 | likely_pathogenic | 0.9871 | pathogenic | -0.182 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
E/Q | 0.2885 | likely_benign | 0.3157 | benign | -0.758 | Destabilizing | 0.889 | D | 0.422 | neutral | N | 0.490189461 | None | None | I |
E/R | 0.6886 | likely_pathogenic | 0.7214 | pathogenic | -0.105 | Destabilizing | 0.998 | D | 0.595 | neutral | None | None | None | None | I |
E/S | 0.6112 | likely_pathogenic | 0.6396 | pathogenic | -1.13 | Destabilizing | 0.992 | D | 0.559 | neutral | None | None | None | None | I |
E/T | 0.6404 | likely_pathogenic | 0.6854 | pathogenic | -0.851 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | I |
E/V | 0.6126 | likely_pathogenic | 0.6807 | pathogenic | -0.182 | Destabilizing | 0.997 | D | 0.636 | neutral | D | 0.538486794 | None | None | I |
E/W | 0.9898 | likely_pathogenic | 0.9921 | pathogenic | -0.032 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
E/Y | 0.9392 | likely_pathogenic | 0.9521 | pathogenic | -0.04 | Destabilizing | 0.784 | D | 0.477 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.