Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7254 | 21985;21986;21987 | chr2:178723247;178723246;178723245 | chr2:179587974;179587973;179587972 |
N2AB | 6937 | 21034;21035;21036 | chr2:178723247;178723246;178723245 | chr2:179587974;179587973;179587972 |
N2A | 6010 | 18253;18254;18255 | chr2:178723247;178723246;178723245 | chr2:179587974;179587973;179587972 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1230527204 | None | None | N | 0.083 | 0.186 | 0.1749357433 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs1230527204 | None | None | N | 0.083 | 0.186 | 0.1749357433 | gnomAD-4.0.0 | 3.09882E-06 | None | None | None | None | I | None | 0 | 1.66756E-05 | None | 0 | 0 | None | 0 | 0 | 2.54302E-06 | 1.09801E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0684 | likely_benign | 0.0701 | benign | -0.499 | Destabilizing | None | N | 0.083 | neutral | N | 0.491250207 | None | None | I |
T/C | 0.2885 | likely_benign | 0.2799 | benign | -0.405 | Destabilizing | 0.676 | D | 0.343 | neutral | None | None | None | None | I |
T/D | 0.3138 | likely_benign | 0.3351 | benign | 0.683 | Stabilizing | 0.038 | N | 0.377 | neutral | None | None | None | None | I |
T/E | 0.2156 | likely_benign | 0.2192 | benign | 0.663 | Stabilizing | 0.038 | N | 0.312 | neutral | None | None | None | None | I |
T/F | 0.1534 | likely_benign | 0.1643 | benign | -0.833 | Destabilizing | 0.214 | N | 0.405 | neutral | None | None | None | None | I |
T/G | 0.1808 | likely_benign | 0.1826 | benign | -0.687 | Destabilizing | 0.016 | N | 0.309 | neutral | None | None | None | None | I |
T/H | 0.1706 | likely_benign | 0.1707 | benign | -0.868 | Destabilizing | 0.356 | N | 0.355 | neutral | None | None | None | None | I |
T/I | 0.1058 | likely_benign | 0.1136 | benign | -0.112 | Destabilizing | 0.029 | N | 0.337 | neutral | N | 0.494215159 | None | None | I |
T/K | 0.1234 | likely_benign | 0.1284 | benign | -0.189 | Destabilizing | None | N | 0.146 | neutral | None | None | None | None | I |
T/L | 0.0815 | likely_benign | 0.084 | benign | -0.112 | Destabilizing | None | N | 0.167 | neutral | None | None | None | None | I |
T/M | 0.0826 | likely_benign | 0.0834 | benign | -0.149 | Destabilizing | 0.214 | N | 0.359 | neutral | None | None | None | None | I |
T/N | 0.1083 | likely_benign | 0.1169 | benign | -0.142 | Destabilizing | 0.029 | N | 0.323 | neutral | N | 0.487480436 | None | None | I |
T/P | 0.463 | ambiguous | 0.4571 | ambiguous | -0.211 | Destabilizing | 0.055 | N | 0.414 | neutral | N | 0.516713961 | None | None | I |
T/Q | 0.1592 | likely_benign | 0.1556 | benign | -0.233 | Destabilizing | 0.12 | N | 0.415 | neutral | None | None | None | None | I |
T/R | 0.0861 | likely_benign | 0.0897 | benign | -0.054 | Destabilizing | 0.038 | N | 0.377 | neutral | None | None | None | None | I |
T/S | 0.0802 | likely_benign | 0.0825 | benign | -0.467 | Destabilizing | None | N | 0.099 | neutral | N | 0.461754019 | None | None | I |
T/V | 0.1041 | likely_benign | 0.1059 | benign | -0.211 | Destabilizing | 0.016 | N | 0.245 | neutral | None | None | None | None | I |
T/W | 0.4176 | ambiguous | 0.4034 | ambiguous | -0.814 | Destabilizing | 0.864 | D | 0.407 | neutral | None | None | None | None | I |
T/Y | 0.1978 | likely_benign | 0.1972 | benign | -0.514 | Destabilizing | 0.356 | N | 0.404 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.