Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7269 | 22030;22031;22032 | chr2:178723202;178723201;178723200 | chr2:179587929;179587928;179587927 |
N2AB | 6952 | 21079;21080;21081 | chr2:178723202;178723201;178723200 | chr2:179587929;179587928;179587927 |
N2A | 6025 | 18298;18299;18300 | chr2:178723202;178723201;178723200 | chr2:179587929;179587928;179587927 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs78990961 | 0.501 | None | N | 0.169 | 0.115 | 0.0482279557977 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 5.81E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/K | rs78990961 | 0.501 | None | N | 0.169 | 0.115 | 0.0482279557977 | gnomAD-4.0.0 | 6.36795E-06 | None | None | None | None | N | None | 0 | 9.15499E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.0905 | likely_benign | 0.0981 | benign | -0.445 | Destabilizing | None | N | 0.175 | neutral | None | None | None | None | N |
N/C | 0.1363 | likely_benign | 0.1336 | benign | 0.251 | Stabilizing | None | N | 0.329 | neutral | None | None | None | None | N |
N/D | 0.0737 | likely_benign | 0.0779 | benign | 0.177 | Stabilizing | None | N | 0.182 | neutral | N | 0.441050673 | None | None | N |
N/E | 0.1339 | likely_benign | 0.1401 | benign | 0.163 | Stabilizing | None | N | 0.161 | neutral | None | None | None | None | N |
N/F | 0.2075 | likely_benign | 0.2259 | benign | -0.668 | Destabilizing | 0.044 | N | 0.527 | neutral | None | None | None | None | N |
N/G | 0.1402 | likely_benign | 0.1532 | benign | -0.653 | Destabilizing | 0.004 | N | 0.175 | neutral | None | None | None | None | N |
N/H | 0.0633 | likely_benign | 0.0655 | benign | -0.604 | Destabilizing | None | N | 0.217 | neutral | N | 0.491172849 | None | None | N |
N/I | 0.0835 | likely_benign | 0.0906 | benign | 0.023 | Stabilizing | 0.007 | N | 0.396 | neutral | N | 0.472933805 | None | None | N |
N/K | 0.1172 | likely_benign | 0.1196 | benign | 0.015 | Stabilizing | None | N | 0.169 | neutral | N | 0.433969985 | None | None | N |
N/L | 0.0916 | likely_benign | 0.0958 | benign | 0.023 | Stabilizing | None | N | 0.223 | neutral | None | None | None | None | N |
N/M | 0.1615 | likely_benign | 0.1692 | benign | 0.312 | Stabilizing | 0.138 | N | 0.433 | neutral | None | None | None | None | N |
N/P | 0.1262 | likely_benign | 0.1301 | benign | -0.105 | Destabilizing | None | N | 0.206 | neutral | None | None | None | None | N |
N/Q | 0.1317 | likely_benign | 0.137 | benign | -0.443 | Destabilizing | 0.009 | N | 0.231 | neutral | None | None | None | None | N |
N/R | 0.113 | likely_benign | 0.1186 | benign | 0.049 | Stabilizing | 0.009 | N | 0.226 | neutral | None | None | None | None | N |
N/S | 0.0612 | likely_benign | 0.0647 | benign | -0.28 | Destabilizing | None | N | 0.147 | neutral | N | 0.44588049 | None | None | N |
N/T | 0.0733 | likely_benign | 0.0764 | benign | -0.138 | Destabilizing | None | N | 0.129 | neutral | N | 0.465159684 | None | None | N |
N/V | 0.093 | likely_benign | 0.0993 | benign | -0.105 | Destabilizing | None | N | 0.235 | neutral | None | None | None | None | N |
N/W | 0.3865 | ambiguous | 0.4122 | ambiguous | -0.591 | Destabilizing | 0.788 | D | 0.416 | neutral | None | None | None | None | N |
N/Y | 0.0842 | likely_benign | 0.0928 | benign | -0.354 | Destabilizing | 0.017 | N | 0.496 | neutral | N | 0.506603662 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.