Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7271 | 22036;22037;22038 | chr2:178723196;178723195;178723194 | chr2:179587923;179587922;179587921 |
N2AB | 6954 | 21085;21086;21087 | chr2:178723196;178723195;178723194 | chr2:179587923;179587922;179587921 |
N2A | 6027 | 18304;18305;18306 | chr2:178723196;178723195;178723194 | chr2:179587923;179587922;179587921 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | D | 0.131 | 0.09 | 0.0297737177859 | gnomAD-4.0.0 | 3.3609E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.675E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0678 | likely_benign | 0.0692 | benign | -0.179 | Destabilizing | None | N | 0.131 | neutral | D | 0.523245195 | None | None | N |
T/C | 0.3498 | ambiguous | 0.3374 | benign | -0.399 | Destabilizing | 0.356 | N | 0.319 | neutral | None | None | None | None | N |
T/D | 0.2092 | likely_benign | 0.2167 | benign | 0.085 | Stabilizing | 0.038 | N | 0.341 | neutral | None | None | None | None | N |
T/E | 0.1704 | likely_benign | 0.1746 | benign | 0.003 | Stabilizing | 0.001 | N | 0.206 | neutral | None | None | None | None | N |
T/F | 0.1291 | likely_benign | 0.1329 | benign | -0.852 | Destabilizing | 0.214 | N | 0.373 | neutral | None | None | None | None | N |
T/G | 0.171 | likely_benign | 0.1746 | benign | -0.247 | Destabilizing | 0.016 | N | 0.347 | neutral | None | None | None | None | N |
T/H | 0.159 | likely_benign | 0.1544 | benign | -0.426 | Destabilizing | 0.356 | N | 0.335 | neutral | None | None | None | None | N |
T/I | 0.1068 | likely_benign | 0.1059 | benign | -0.123 | Destabilizing | None | N | 0.183 | neutral | D | 0.523015909 | None | None | N |
T/K | 0.122 | likely_benign | 0.116 | benign | -0.271 | Destabilizing | 0.016 | N | 0.33 | neutral | None | None | None | None | N |
T/L | 0.0769 | likely_benign | 0.0783 | benign | -0.123 | Destabilizing | 0.002 | N | 0.281 | neutral | None | None | None | None | N |
T/M | 0.0851 | likely_benign | 0.0868 | benign | -0.19 | Destabilizing | 0.007 | N | 0.263 | neutral | None | None | None | None | N |
T/N | 0.0924 | likely_benign | 0.0947 | benign | -0.15 | Destabilizing | 0.029 | N | 0.187 | neutral | N | 0.516452509 | None | None | N |
T/P | 0.0883 | likely_benign | 0.0902 | benign | -0.117 | Destabilizing | 0.055 | N | 0.373 | neutral | N | 0.501928561 | None | None | N |
T/Q | 0.144 | likely_benign | 0.1415 | benign | -0.315 | Destabilizing | 0.072 | N | 0.379 | neutral | None | None | None | None | N |
T/R | 0.0972 | likely_benign | 0.0955 | benign | -0.017 | Destabilizing | None | N | 0.207 | neutral | None | None | None | None | N |
T/S | 0.0837 | likely_benign | 0.0871 | benign | -0.3 | Destabilizing | None | N | 0.155 | neutral | N | 0.462119379 | None | None | N |
T/V | 0.1011 | likely_benign | 0.1005 | benign | -0.117 | Destabilizing | 0.006 | N | 0.163 | neutral | None | None | None | None | N |
T/W | 0.3868 | ambiguous | 0.3941 | ambiguous | -0.953 | Destabilizing | 0.864 | D | 0.344 | neutral | None | None | None | None | N |
T/Y | 0.1725 | likely_benign | 0.1724 | benign | -0.616 | Destabilizing | 0.356 | N | 0.352 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.