Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7279 | 22060;22061;22062 | chr2:178723172;178723171;178723170 | chr2:179587899;179587898;179587897 |
N2AB | 6962 | 21109;21110;21111 | chr2:178723172;178723171;178723170 | chr2:179587899;179587898;179587897 |
N2A | 6035 | 18328;18329;18330 | chr2:178723172;178723171;178723170 | chr2:179587899;179587898;179587897 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.324 | N | 0.459 | 0.27 | 0.649841373658 | gnomAD-4.0.0 | 1.59188E-06 | None | None | None | None | I | None | 5.66187E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.15 | likely_benign | 0.1855 | benign | -0.845 | Destabilizing | 0.09 | N | 0.255 | neutral | N | 0.481782575 | None | None | I |
V/C | 0.694 | likely_pathogenic | 0.7408 | pathogenic | -0.624 | Destabilizing | 0.981 | D | 0.394 | neutral | None | None | None | None | I |
V/D | 0.2754 | likely_benign | 0.3623 | ambiguous | -0.644 | Destabilizing | 0.324 | N | 0.459 | neutral | N | 0.454577331 | None | None | I |
V/E | 0.2134 | likely_benign | 0.2785 | benign | -0.735 | Destabilizing | 0.388 | N | 0.413 | neutral | None | None | None | None | I |
V/F | 0.1078 | likely_benign | 0.1323 | benign | -0.914 | Destabilizing | 0.627 | D | 0.411 | neutral | N | 0.485497671 | None | None | I |
V/G | 0.222 | likely_benign | 0.2745 | benign | -1.046 | Destabilizing | 0.324 | N | 0.447 | neutral | N | 0.496194667 | None | None | I |
V/H | 0.3798 | ambiguous | 0.47 | ambiguous | -0.614 | Destabilizing | 0.981 | D | 0.461 | neutral | None | None | None | None | I |
V/I | 0.0688 | likely_benign | 0.0748 | benign | -0.443 | Destabilizing | 0.001 | N | 0.123 | neutral | N | 0.4270468 | None | None | I |
V/K | 0.2463 | likely_benign | 0.3093 | benign | -0.698 | Destabilizing | 0.388 | N | 0.413 | neutral | None | None | None | None | I |
V/L | 0.1397 | likely_benign | 0.167 | benign | -0.443 | Destabilizing | 0.015 | N | 0.193 | neutral | N | 0.443688334 | None | None | I |
V/M | 0.1085 | likely_benign | 0.131 | benign | -0.301 | Destabilizing | 0.69 | D | 0.411 | neutral | None | None | None | None | I |
V/N | 0.1918 | likely_benign | 0.2458 | benign | -0.383 | Destabilizing | 0.69 | D | 0.477 | neutral | None | None | None | None | I |
V/P | 0.8639 | likely_pathogenic | 0.8876 | pathogenic | -0.541 | Destabilizing | 0.818 | D | 0.456 | neutral | None | None | None | None | I |
V/Q | 0.2328 | likely_benign | 0.2917 | benign | -0.647 | Destabilizing | 0.818 | D | 0.488 | neutral | None | None | None | None | I |
V/R | 0.212 | likely_benign | 0.2626 | benign | -0.129 | Destabilizing | 0.69 | D | 0.497 | neutral | None | None | None | None | I |
V/S | 0.1558 | likely_benign | 0.1947 | benign | -0.794 | Destabilizing | 0.241 | N | 0.399 | neutral | None | None | None | None | I |
V/T | 0.1091 | likely_benign | 0.1383 | benign | -0.783 | Destabilizing | 0.001 | N | 0.09 | neutral | None | None | None | None | I |
V/W | 0.6794 | likely_pathogenic | 0.7561 | pathogenic | -1.012 | Destabilizing | 0.981 | D | 0.495 | neutral | None | None | None | None | I |
V/Y | 0.3882 | ambiguous | 0.4507 | ambiguous | -0.717 | Destabilizing | 0.818 | D | 0.419 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.