Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7282 | 22069;22070;22071 | chr2:178723163;178723162;178723161 | chr2:179587890;179587889;179587888 |
N2AB | 6965 | 21118;21119;21120 | chr2:178723163;178723162;178723161 | chr2:179587890;179587889;179587888 |
N2A | 6038 | 18337;18338;18339 | chr2:178723163;178723162;178723161 | chr2:179587890;179587889;179587888 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.026 | N | 0.231 | 0.105 | 0.0716867268079 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs757098573 | 0.038 | 0.026 | N | 0.306 | 0.196 | 0.180583059064 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
E/K | rs778532757 | 0.694 | 0.896 | N | 0.419 | 0.239 | 0.226586394389 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4E-05 | 1.57E-05 | 0 |
E/K | rs778532757 | 0.694 | 0.896 | N | 0.419 | 0.239 | 0.226586394389 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 7.35E-05 | 0 | 0 |
E/K | rs778532757 | 0.694 | 0.896 | N | 0.419 | 0.239 | 0.226586394389 | gnomAD-4.0.0 | 2.97507E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.12539E-05 | 0 | 3.89947E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1883 | likely_benign | 0.2403 | benign | -0.155 | Destabilizing | 0.103 | N | 0.279 | neutral | N | 0.459388644 | None | None | I |
E/C | 0.929 | likely_pathogenic | 0.9521 | pathogenic | -0.358 | Destabilizing | 0.999 | D | 0.533 | neutral | None | None | None | None | I |
E/D | 0.1101 | likely_benign | 0.1593 | benign | -0.418 | Destabilizing | 0.026 | N | 0.231 | neutral | N | 0.445663406 | None | None | I |
E/F | 0.8792 | likely_pathogenic | 0.9247 | pathogenic | 0.008 | Stabilizing | 0.996 | D | 0.493 | neutral | None | None | None | None | I |
E/G | 0.1229 | likely_benign | 0.1532 | benign | -0.32 | Destabilizing | 0.026 | N | 0.306 | neutral | N | 0.414876353 | None | None | I |
E/H | 0.5714 | likely_pathogenic | 0.6686 | pathogenic | 0.619 | Stabilizing | 0.999 | D | 0.388 | neutral | None | None | None | None | I |
E/I | 0.6284 | likely_pathogenic | 0.734 | pathogenic | 0.237 | Stabilizing | 0.988 | D | 0.495 | neutral | None | None | None | None | I |
E/K | 0.1502 | likely_benign | 0.1805 | benign | 0.319 | Stabilizing | 0.896 | D | 0.419 | neutral | N | 0.453539294 | None | None | I |
E/L | 0.5932 | likely_pathogenic | 0.697 | pathogenic | 0.237 | Stabilizing | 0.976 | D | 0.461 | neutral | None | None | None | None | I |
E/M | 0.6563 | likely_pathogenic | 0.7382 | pathogenic | -0.02 | Destabilizing | 0.999 | D | 0.485 | neutral | None | None | None | None | I |
E/N | 0.263 | likely_benign | 0.3646 | ambiguous | -0.146 | Destabilizing | 0.952 | D | 0.376 | neutral | None | None | None | None | I |
E/P | 0.377 | ambiguous | 0.4817 | ambiguous | 0.125 | Stabilizing | 0.988 | D | 0.411 | neutral | None | None | None | None | I |
E/Q | 0.1743 | likely_benign | 0.2033 | benign | -0.091 | Destabilizing | 0.984 | D | 0.369 | neutral | N | 0.465656068 | None | None | I |
E/R | 0.2642 | likely_benign | 0.3069 | benign | 0.671 | Stabilizing | 0.988 | D | 0.384 | neutral | None | None | None | None | I |
E/S | 0.2094 | likely_benign | 0.2706 | benign | -0.255 | Destabilizing | 0.851 | D | 0.391 | neutral | None | None | None | None | I |
E/T | 0.3313 | likely_benign | 0.4213 | ambiguous | -0.106 | Destabilizing | 0.919 | D | 0.426 | neutral | None | None | None | None | I |
E/V | 0.4034 | ambiguous | 0.4969 | ambiguous | 0.125 | Stabilizing | 0.968 | D | 0.407 | neutral | N | 0.475886737 | None | None | I |
E/W | 0.9235 | likely_pathogenic | 0.9513 | pathogenic | 0.128 | Stabilizing | 0.999 | D | 0.581 | neutral | None | None | None | None | I |
E/Y | 0.7585 | likely_pathogenic | 0.8391 | pathogenic | 0.245 | Stabilizing | 0.996 | D | 0.461 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.