Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7287 | 22084;22085;22086 | chr2:178723148;178723147;178723146 | chr2:179587875;179587874;179587873 |
N2AB | 6970 | 21133;21134;21135 | chr2:178723148;178723147;178723146 | chr2:179587875;179587874;179587873 |
N2A | 6043 | 18352;18353;18354 | chr2:178723148;178723147;178723146 | chr2:179587875;179587874;179587873 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs754054875 | -1.544 | 0.998 | D | 0.701 | 0.592 | 0.737275244558 | gnomAD-2.1.1 | 7.15E-06 | None | None | None | None | N | None | 8.27E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/V | rs754054875 | -1.544 | 0.998 | D | 0.701 | 0.592 | 0.737275244558 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs754054875 | -1.544 | 0.998 | D | 0.701 | 0.592 | 0.737275244558 | gnomAD-4.0.0 | 3.09914E-06 | None | None | None | None | N | None | 6.67824E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9143 | likely_pathogenic | 0.9018 | pathogenic | -2.792 | Highly Destabilizing | 0.997 | D | 0.774 | deleterious | None | None | None | None | N |
L/C | 0.9323 | likely_pathogenic | 0.9213 | pathogenic | -2.09 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.719 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
L/E | 0.9971 | likely_pathogenic | 0.9968 | pathogenic | -3.408 | Highly Destabilizing | 0.998 | D | 0.877 | deleterious | None | None | None | None | N |
L/F | 0.6175 | likely_pathogenic | 0.6114 | pathogenic | -1.734 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
L/G | 0.9901 | likely_pathogenic | 0.9889 | pathogenic | -3.377 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
L/H | 0.992 | likely_pathogenic | 0.9904 | pathogenic | -3.065 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
L/I | 0.2923 | likely_benign | 0.2372 | benign | -1.026 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
L/K | 0.9945 | likely_pathogenic | 0.9933 | pathogenic | -2.345 | Highly Destabilizing | 0.998 | D | 0.871 | deleterious | None | None | None | None | N |
L/M | 0.3552 | ambiguous | 0.3581 | ambiguous | -1.149 | Destabilizing | 1.0 | D | 0.763 | deleterious | D | 0.553970244 | None | None | N |
L/N | 0.9983 | likely_pathogenic | 0.9981 | pathogenic | -3.056 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/P | 0.9977 | likely_pathogenic | 0.9971 | pathogenic | -1.606 | Destabilizing | 1.0 | D | 0.905 | deleterious | D | 0.566847487 | None | None | N |
L/Q | 0.9853 | likely_pathogenic | 0.9827 | pathogenic | -2.739 | Highly Destabilizing | 0.981 | D | 0.676 | prob.neutral | D | 0.566847487 | None | None | N |
L/R | 0.9849 | likely_pathogenic | 0.9813 | pathogenic | -2.318 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | D | 0.578368376 | None | None | N |
L/S | 0.9916 | likely_pathogenic | 0.991 | pathogenic | -3.579 | Highly Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
L/T | 0.9649 | likely_pathogenic | 0.9577 | pathogenic | -3.11 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
L/V | 0.3353 | likely_benign | 0.2686 | benign | -1.606 | Destabilizing | 0.998 | D | 0.701 | prob.neutral | D | 0.546968805 | None | None | N |
L/W | 0.9537 | likely_pathogenic | 0.9475 | pathogenic | -2.188 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/Y | 0.9711 | likely_pathogenic | 0.9683 | pathogenic | -1.956 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.