Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7291 | 22096;22097;22098 | chr2:178723136;178723135;178723134 | chr2:179587863;179587862;179587861 |
N2AB | 6974 | 21145;21146;21147 | chr2:178723136;178723135;178723134 | chr2:179587863;179587862;179587861 |
N2A | 6047 | 18364;18365;18366 | chr2:178723136;178723135;178723134 | chr2:179587863;179587862;179587861 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.062 | N | 0.287 | 0.083 | 0.115124310173 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1641 | likely_benign | 0.1581 | benign | -0.442 | Destabilizing | 0.035 | N | 0.352 | neutral | None | None | None | None | N |
N/C | 0.2434 | likely_benign | 0.2211 | benign | 0.385 | Stabilizing | 0.824 | D | 0.355 | neutral | None | None | None | None | N |
N/D | 0.0803 | likely_benign | 0.0785 | benign | -0.087 | Destabilizing | None | N | 0.139 | neutral | N | 0.485800662 | None | None | N |
N/E | 0.2229 | likely_benign | 0.2017 | benign | -0.135 | Destabilizing | 0.035 | N | 0.321 | neutral | None | None | None | None | N |
N/F | 0.3888 | ambiguous | 0.3758 | ambiguous | -0.936 | Destabilizing | 0.555 | D | 0.383 | neutral | None | None | None | None | N |
N/G | 0.1671 | likely_benign | 0.1757 | benign | -0.584 | Destabilizing | 0.035 | N | 0.376 | neutral | None | None | None | None | N |
N/H | 0.0791 | likely_benign | 0.0789 | benign | -0.743 | Destabilizing | 0.484 | N | 0.333 | neutral | N | 0.509411027 | None | None | N |
N/I | 0.2578 | likely_benign | 0.2176 | benign | -0.157 | Destabilizing | 0.317 | N | 0.399 | neutral | N | 0.508833699 | None | None | N |
N/K | 0.191 | likely_benign | 0.1756 | benign | 0.199 | Stabilizing | 0.062 | N | 0.287 | neutral | N | 0.499153961 | None | None | N |
N/L | 0.2124 | likely_benign | 0.1956 | benign | -0.157 | Destabilizing | 0.081 | N | 0.406 | neutral | None | None | None | None | N |
N/M | 0.3192 | likely_benign | 0.3036 | benign | 0.439 | Stabilizing | 0.935 | D | 0.341 | neutral | None | None | None | None | N |
N/P | 0.5037 | ambiguous | 0.4443 | ambiguous | -0.228 | Destabilizing | 0.38 | N | 0.381 | neutral | None | None | None | None | N |
N/Q | 0.2029 | likely_benign | 0.1953 | benign | -0.358 | Destabilizing | 0.38 | N | 0.326 | neutral | None | None | None | None | N |
N/R | 0.2046 | likely_benign | 0.1915 | benign | 0.291 | Stabilizing | 0.149 | N | 0.351 | neutral | None | None | None | None | N |
N/S | 0.0728 | likely_benign | 0.0751 | benign | -0.052 | Destabilizing | None | N | 0.091 | neutral | N | 0.464233311 | None | None | N |
N/T | 0.1289 | likely_benign | 0.1118 | benign | 0.035 | Stabilizing | None | N | 0.153 | neutral | N | 0.504831927 | None | None | N |
N/V | 0.2547 | likely_benign | 0.2148 | benign | -0.228 | Destabilizing | 0.081 | N | 0.436 | neutral | None | None | None | None | N |
N/W | 0.6256 | likely_pathogenic | 0.6119 | pathogenic | -0.903 | Destabilizing | 0.935 | D | 0.5 | neutral | None | None | None | None | N |
N/Y | 0.1226 | likely_benign | 0.1183 | benign | -0.628 | Destabilizing | 0.484 | N | 0.359 | neutral | N | 0.50832672 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.