Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7293 | 22102;22103;22104 | chr2:178723130;178723129;178723128 | chr2:179587857;179587856;179587855 |
N2AB | 6976 | 21151;21152;21153 | chr2:178723130;178723129;178723128 | chr2:179587857;179587856;179587855 |
N2A | 6049 | 18370;18371;18372 | chr2:178723130;178723129;178723128 | chr2:179587857;179587856;179587855 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs764415612 | -0.437 | 0.996 | D | 0.367 | 0.484 | 0.486135451721 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
T/P | rs764415612 | -0.437 | 0.996 | D | 0.367 | 0.484 | 0.486135451721 | gnomAD-4.0.0 | 1.3686E-06 | None | None | None | None | N | None | 0 | 0 | None | 3.82848E-05 | 0 | None | 0 | 0 | 8.99551E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0887 | likely_benign | 0.0871 | benign | -0.615 | Destabilizing | 0.826 | D | 0.29 | neutral | N | 0.49779633 | None | None | N |
T/C | 0.4201 | ambiguous | 0.4137 | ambiguous | -0.199 | Destabilizing | 0.999 | D | 0.375 | neutral | None | None | None | None | N |
T/D | 0.1789 | likely_benign | 0.1842 | benign | -0.397 | Destabilizing | 0.02 | N | 0.115 | neutral | None | None | None | None | N |
T/E | 0.1717 | likely_benign | 0.1752 | benign | -0.439 | Destabilizing | 0.17 | N | 0.152 | neutral | None | None | None | None | N |
T/F | 0.2838 | likely_benign | 0.2788 | benign | -0.911 | Destabilizing | 0.997 | D | 0.407 | neutral | None | None | None | None | N |
T/G | 0.1732 | likely_benign | 0.1746 | benign | -0.822 | Destabilizing | 0.02 | N | 0.152 | neutral | None | None | None | None | N |
T/H | 0.223 | likely_benign | 0.2409 | benign | -1.233 | Destabilizing | 0.997 | D | 0.389 | neutral | None | None | None | None | N |
T/I | 0.2707 | likely_benign | 0.2441 | benign | -0.168 | Destabilizing | 0.996 | D | 0.374 | neutral | N | 0.520966695 | None | None | N |
T/K | 0.1483 | likely_benign | 0.1595 | benign | -0.624 | Destabilizing | 0.92 | D | 0.297 | neutral | N | 0.508198385 | None | None | N |
T/L | 0.1374 | likely_benign | 0.1329 | benign | -0.168 | Destabilizing | 0.969 | D | 0.308 | neutral | None | None | None | None | N |
T/M | 0.1234 | likely_benign | 0.1227 | benign | 0.33 | Stabilizing | 0.999 | D | 0.35 | neutral | None | None | None | None | N |
T/N | 0.0957 | likely_benign | 0.0979 | benign | -0.439 | Destabilizing | 0.939 | D | 0.223 | neutral | None | None | None | None | N |
T/P | 0.2262 | likely_benign | 0.2431 | benign | -0.286 | Destabilizing | 0.996 | D | 0.367 | neutral | D | 0.539324439 | None | None | N |
T/Q | 0.1488 | likely_benign | 0.1637 | benign | -0.713 | Destabilizing | 0.982 | D | 0.355 | neutral | None | None | None | None | N |
T/R | 0.1163 | likely_benign | 0.1299 | benign | -0.328 | Destabilizing | 0.976 | D | 0.368 | neutral | N | 0.485870594 | None | None | N |
T/S | 0.0774 | likely_benign | 0.0792 | benign | -0.639 | Destabilizing | 0.826 | D | 0.273 | neutral | N | 0.497560104 | None | None | N |
T/V | 0.1878 | likely_benign | 0.1677 | benign | -0.286 | Destabilizing | 0.969 | D | 0.212 | neutral | None | None | None | None | N |
T/W | 0.5357 | ambiguous | 0.5519 | ambiguous | -0.872 | Destabilizing | 0.999 | D | 0.45 | neutral | None | None | None | None | N |
T/Y | 0.3225 | likely_benign | 0.3217 | benign | -0.623 | Destabilizing | 0.997 | D | 0.403 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.