Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7294 | 22105;22106;22107 | chr2:178723127;178723126;178723125 | chr2:179587854;179587853;179587852 |
N2AB | 6977 | 21154;21155;21156 | chr2:178723127;178723126;178723125 | chr2:179587854;179587853;179587852 |
N2A | 6050 | 18373;18374;18375 | chr2:178723127;178723126;178723125 | chr2:179587854;179587853;179587852 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1333823103 | 0.344 | 0.565 | N | 0.427 | 0.193 | 0.188950314367 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 8.71E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs1333823103 | 0.344 | 0.565 | N | 0.427 | 0.193 | 0.188950314367 | gnomAD-4.0.0 | 4.77528E-06 | None | None | None | None | N | None | 0 | 6.86185E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1828 | likely_benign | 0.186 | benign | 0.128 | Stabilizing | 0.633 | D | 0.416 | neutral | None | None | None | None | N |
K/C | 0.6695 | likely_pathogenic | 0.6816 | pathogenic | -0.072 | Destabilizing | 0.996 | D | 0.571 | neutral | None | None | None | None | N |
K/D | 0.2994 | likely_benign | 0.3138 | benign | 0.015 | Stabilizing | 0.923 | D | 0.357 | neutral | None | None | None | None | N |
K/E | 0.0914 | likely_benign | 0.0972 | benign | 0.017 | Stabilizing | 0.565 | D | 0.427 | neutral | N | 0.456496475 | None | None | N |
K/F | 0.5844 | likely_pathogenic | 0.5874 | pathogenic | -0.101 | Destabilizing | 0.987 | D | 0.532 | neutral | None | None | None | None | N |
K/G | 0.2471 | likely_benign | 0.2649 | benign | -0.054 | Destabilizing | 0.775 | D | 0.381 | neutral | None | None | None | None | N |
K/H | 0.2842 | likely_benign | 0.3099 | benign | -0.289 | Destabilizing | 0.989 | D | 0.407 | neutral | None | None | None | None | N |
K/I | 0.1992 | likely_benign | 0.2018 | benign | 0.528 | Stabilizing | 0.901 | D | 0.533 | neutral | N | 0.499844608 | None | None | N |
K/L | 0.2217 | likely_benign | 0.2346 | benign | 0.528 | Stabilizing | 0.775 | D | 0.397 | neutral | None | None | None | None | N |
K/M | 0.1709 | likely_benign | 0.1794 | benign | 0.213 | Stabilizing | 0.989 | D | 0.407 | neutral | None | None | None | None | N |
K/N | 0.243 | likely_benign | 0.2511 | benign | 0.381 | Stabilizing | 0.901 | D | 0.36 | neutral | N | 0.486974098 | None | None | N |
K/P | 0.3113 | likely_benign | 0.3173 | benign | 0.422 | Stabilizing | 0.961 | D | 0.403 | neutral | None | None | None | None | N |
K/Q | 0.1039 | likely_benign | 0.1098 | benign | 0.228 | Stabilizing | 0.075 | N | 0.27 | neutral | N | 0.511235037 | None | None | N |
K/R | 0.0772 | likely_benign | 0.0801 | benign | 0.055 | Stabilizing | 0.565 | D | 0.427 | neutral | N | 0.442969818 | None | None | N |
K/S | 0.2173 | likely_benign | 0.2225 | benign | -0.037 | Destabilizing | 0.633 | D | 0.411 | neutral | None | None | None | None | N |
K/T | 0.1207 | likely_benign | 0.1277 | benign | 0.102 | Stabilizing | 0.034 | N | 0.33 | neutral | N | 0.483683077 | None | None | N |
K/V | 0.187 | likely_benign | 0.1918 | benign | 0.422 | Stabilizing | 0.923 | D | 0.385 | neutral | None | None | None | None | N |
K/W | 0.6492 | likely_pathogenic | 0.6698 | pathogenic | -0.171 | Destabilizing | 0.996 | D | 0.6 | neutral | None | None | None | None | N |
K/Y | 0.4747 | ambiguous | 0.4974 | ambiguous | 0.189 | Stabilizing | 0.961 | D | 0.476 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.