Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7304 | 22135;22136;22137 | chr2:178723097;178723096;178723095 | chr2:179587824;179587823;179587822 |
N2AB | 6987 | 21184;21185;21186 | chr2:178723097;178723096;178723095 | chr2:179587824;179587823;179587822 |
N2A | 6060 | 18403;18404;18405 | chr2:178723097;178723096;178723095 | chr2:179587824;179587823;179587822 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs766599708 | -2.815 | 0.324 | N | 0.739 | 0.27 | 0.598985906569 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
I/T | rs766599708 | -2.815 | 0.324 | N | 0.739 | 0.27 | 0.598985906569 | gnomAD-4.0.0 | 4.10583E-06 | None | None | None | None | N | None | 0 | 2.23664E-05 | None | 0 | 0 | None | 0 | 0 | 4.49779E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4492 | ambiguous | 0.4486 | ambiguous | -2.976 | Highly Destabilizing | 0.116 | N | 0.691 | prob.neutral | None | None | None | None | N |
I/C | 0.9423 | likely_pathogenic | 0.9488 | pathogenic | -2.373 | Highly Destabilizing | 0.944 | D | 0.79 | deleterious | None | None | None | None | N |
I/D | 0.9971 | likely_pathogenic | 0.9964 | pathogenic | -3.632 | Highly Destabilizing | 0.818 | D | 0.853 | deleterious | None | None | None | None | N |
I/E | 0.99 | likely_pathogenic | 0.9876 | pathogenic | -3.369 | Highly Destabilizing | 0.818 | D | 0.835 | deleterious | None | None | None | None | N |
I/F | 0.7809 | likely_pathogenic | 0.7921 | pathogenic | -1.648 | Destabilizing | 0.627 | D | 0.76 | deleterious | N | 0.503863171 | None | None | N |
I/G | 0.9471 | likely_pathogenic | 0.9471 | pathogenic | -3.517 | Highly Destabilizing | 0.818 | D | 0.815 | deleterious | None | None | None | None | N |
I/H | 0.9954 | likely_pathogenic | 0.9949 | pathogenic | -2.984 | Highly Destabilizing | 0.981 | D | 0.837 | deleterious | None | None | None | None | N |
I/K | 0.9865 | likely_pathogenic | 0.9829 | pathogenic | -2.291 | Highly Destabilizing | 0.818 | D | 0.821 | deleterious | None | None | None | None | N |
I/L | 0.261 | likely_benign | 0.2881 | benign | -1.365 | Destabilizing | 0.001 | N | 0.285 | neutral | N | 0.50435279 | None | None | N |
I/M | 0.2504 | likely_benign | 0.2547 | benign | -1.593 | Destabilizing | 0.627 | D | 0.712 | prob.delet. | N | 0.488886015 | None | None | N |
I/N | 0.9656 | likely_pathogenic | 0.959 | pathogenic | -2.799 | Highly Destabilizing | 0.912 | D | 0.853 | deleterious | N | 0.51563755 | None | None | N |
I/P | 0.9915 | likely_pathogenic | 0.9902 | pathogenic | -1.891 | Destabilizing | 0.932 | D | 0.856 | deleterious | None | None | None | None | N |
I/Q | 0.987 | likely_pathogenic | 0.985 | pathogenic | -2.577 | Highly Destabilizing | 0.932 | D | 0.851 | deleterious | None | None | None | None | N |
I/R | 0.9749 | likely_pathogenic | 0.9695 | pathogenic | -2.061 | Highly Destabilizing | 0.818 | D | 0.856 | deleterious | None | None | None | None | N |
I/S | 0.8533 | likely_pathogenic | 0.8456 | pathogenic | -3.391 | Highly Destabilizing | 0.627 | D | 0.798 | deleterious | N | 0.491999887 | None | None | N |
I/T | 0.4597 | ambiguous | 0.4621 | ambiguous | -2.992 | Highly Destabilizing | 0.324 | N | 0.739 | prob.delet. | N | 0.485251937 | None | None | N |
I/V | 0.0783 | likely_benign | 0.0903 | benign | -1.891 | Destabilizing | 0.001 | N | 0.259 | neutral | N | 0.401758779 | None | None | N |
I/W | 0.9945 | likely_pathogenic | 0.9937 | pathogenic | -2.085 | Highly Destabilizing | 0.981 | D | 0.827 | deleterious | None | None | None | None | N |
I/Y | 0.9789 | likely_pathogenic | 0.975 | pathogenic | -1.918 | Destabilizing | 0.818 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.