Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7305 | 22138;22139;22140 | chr2:178723094;178723093;178723092 | chr2:179587821;179587820;179587819 |
N2AB | 6988 | 21187;21188;21189 | chr2:178723094;178723093;178723092 | chr2:179587821;179587820;179587819 |
N2A | 6061 | 18406;18407;18408 | chr2:178723094;178723093;178723092 | chr2:179587821;179587820;179587819 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1553911785 | None | 0.042 | N | 0.402 | 0.209 | 0.332902724076 | gnomAD-4.0.0 | 6.36687E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.10951E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs763316110 | -0.955 | 0.175 | D | 0.285 | 0.061 | 0.218112801441 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs763316110 | -0.955 | 0.175 | D | 0.285 | 0.061 | 0.218112801441 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs763316110 | -0.955 | 0.175 | D | 0.285 | 0.061 | 0.218112801441 | gnomAD-4.0.0 | 6.40681E-06 | None | None | None | None | I | None | 8.45823E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1217 | likely_benign | 0.115 | benign | -0.706 | Destabilizing | 0.042 | N | 0.402 | neutral | N | 0.491328324 | None | None | I |
E/C | 0.6851 | likely_pathogenic | 0.7139 | pathogenic | -0.156 | Destabilizing | 0.883 | D | 0.527 | neutral | None | None | None | None | I |
E/D | 0.2003 | likely_benign | 0.2559 | benign | -0.854 | Destabilizing | 0.175 | N | 0.285 | neutral | D | 0.531886108 | None | None | I |
E/F | 0.535 | ambiguous | 0.5494 | ambiguous | -0.699 | Destabilizing | 0.497 | N | 0.556 | neutral | None | None | None | None | I |
E/G | 0.1556 | likely_benign | 0.1581 | benign | -0.981 | Destabilizing | 0.175 | N | 0.475 | neutral | N | 0.486519385 | None | None | I |
E/H | 0.2915 | likely_benign | 0.2996 | benign | -0.952 | Destabilizing | 0.859 | D | 0.483 | neutral | None | None | None | None | I |
E/I | 0.2393 | likely_benign | 0.2408 | benign | 0.013 | Stabilizing | 0.004 | N | 0.34 | neutral | None | None | None | None | I |
E/K | 0.0987 | likely_benign | 0.096 | benign | -0.115 | Destabilizing | 0.175 | N | 0.273 | neutral | N | 0.496405311 | None | None | I |
E/L | 0.292 | likely_benign | 0.2924 | benign | 0.013 | Stabilizing | None | N | 0.315 | neutral | None | None | None | None | I |
E/M | 0.315 | likely_benign | 0.3021 | benign | 0.458 | Stabilizing | 0.497 | N | 0.517 | neutral | None | None | None | None | I |
E/N | 0.2455 | likely_benign | 0.2934 | benign | -0.425 | Destabilizing | 0.22 | N | 0.403 | neutral | None | None | None | None | I |
E/P | 0.9576 | likely_pathogenic | 0.9658 | pathogenic | -0.206 | Destabilizing | 0.667 | D | 0.488 | neutral | None | None | None | None | I |
E/Q | 0.0877 | likely_benign | 0.0835 | benign | -0.387 | Destabilizing | 0.301 | N | 0.427 | neutral | D | 0.529480521 | None | None | I |
E/R | 0.1457 | likely_benign | 0.1364 | benign | -0.071 | Destabilizing | 0.667 | D | 0.425 | neutral | None | None | None | None | I |
E/S | 0.1444 | likely_benign | 0.1475 | benign | -0.68 | Destabilizing | 0.005 | N | 0.101 | neutral | None | None | None | None | I |
E/T | 0.1418 | likely_benign | 0.1398 | benign | -0.452 | Destabilizing | 0.055 | N | 0.389 | neutral | None | None | None | None | I |
E/V | 0.1577 | likely_benign | 0.156 | benign | -0.206 | Destabilizing | 0.001 | N | 0.283 | neutral | D | 0.534406338 | None | None | I |
E/W | 0.733 | likely_pathogenic | 0.7378 | pathogenic | -0.573 | Destabilizing | 0.958 | D | 0.569 | neutral | None | None | None | None | I |
E/Y | 0.4746 | ambiguous | 0.4933 | ambiguous | -0.453 | Destabilizing | 0.667 | D | 0.526 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.