Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7310 | 22153;22154;22155 | chr2:178723079;178723078;178723077 | chr2:179587806;179587805;179587804 |
N2AB | 6993 | 21202;21203;21204 | chr2:178723079;178723078;178723077 | chr2:179587806;179587805;179587804 |
N2A | 6066 | 18421;18422;18423 | chr2:178723079;178723078;178723077 | chr2:179587806;179587805;179587804 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/M | None | None | 0.56 | N | 0.457 | 0.159 | 0.259761712551 | gnomAD-4.0.0 | 1.59175E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8592E-06 | 0 | 0 |
R/S | None | None | 0.001 | N | 0.231 | 0.096 | 0.101711395817 | gnomAD-4.0.0 | 1.59178E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85923E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1665 | likely_benign | 0.1986 | benign | 0.038 | Stabilizing | 0.016 | N | 0.351 | neutral | None | None | None | None | I |
R/C | 0.1554 | likely_benign | 0.1777 | benign | -0.08 | Destabilizing | 0.864 | D | 0.485 | neutral | None | None | None | None | I |
R/D | 0.3742 | ambiguous | 0.4473 | ambiguous | -0.121 | Destabilizing | 0.016 | N | 0.476 | neutral | None | None | None | None | I |
R/E | 0.1697 | likely_benign | 0.1977 | benign | -0.055 | Destabilizing | None | N | 0.168 | neutral | None | None | None | None | I |
R/F | 0.3213 | likely_benign | 0.3638 | ambiguous | -0.131 | Destabilizing | 0.12 | N | 0.521 | neutral | None | None | None | None | I |
R/G | 0.0989 | likely_benign | 0.1253 | benign | -0.166 | Destabilizing | 0.012 | N | 0.5 | neutral | D | 0.52366927 | None | None | I |
R/H | 0.0877 | likely_benign | 0.0886 | benign | -0.644 | Destabilizing | None | N | 0.177 | neutral | None | None | None | None | I |
R/I | 0.1568 | likely_benign | 0.1799 | benign | 0.541 | Stabilizing | 0.356 | N | 0.523 | neutral | None | None | None | None | I |
R/K | 0.0645 | likely_benign | 0.0684 | benign | -0.044 | Destabilizing | None | N | 0.153 | neutral | N | 0.424771712 | None | None | I |
R/L | 0.1552 | likely_benign | 0.1772 | benign | 0.541 | Stabilizing | 0.031 | N | 0.475 | neutral | None | None | None | None | I |
R/M | 0.1438 | likely_benign | 0.1638 | benign | 0.094 | Stabilizing | 0.56 | D | 0.457 | neutral | N | 0.501293842 | None | None | I |
R/N | 0.2662 | likely_benign | 0.3114 | benign | 0.213 | Stabilizing | 0.016 | N | 0.364 | neutral | None | None | None | None | I |
R/P | 0.6654 | likely_pathogenic | 0.6822 | pathogenic | 0.394 | Stabilizing | 0.136 | N | 0.544 | neutral | None | None | None | None | I |
R/Q | 0.0785 | likely_benign | 0.0835 | benign | 0.109 | Stabilizing | None | N | 0.169 | neutral | None | None | None | None | I |
R/S | 0.1822 | likely_benign | 0.2177 | benign | -0.114 | Destabilizing | 0.001 | N | 0.231 | neutral | N | 0.406746099 | None | None | I |
R/T | 0.1014 | likely_benign | 0.1127 | benign | 0.085 | Stabilizing | 0.012 | N | 0.435 | neutral | N | 0.438762516 | None | None | I |
R/V | 0.1916 | likely_benign | 0.2241 | benign | 0.394 | Stabilizing | 0.072 | N | 0.569 | neutral | None | None | None | None | I |
R/W | 0.1307 | likely_benign | 0.1362 | benign | -0.174 | Destabilizing | None | N | 0.321 | neutral | N | 0.493721407 | None | None | I |
R/Y | 0.2548 | likely_benign | 0.2849 | benign | 0.225 | Stabilizing | 0.038 | N | 0.567 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.