Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7311 | 22156;22157;22158 | chr2:178723076;178723075;178723074 | chr2:179587803;179587802;179587801 |
N2AB | 6994 | 21205;21206;21207 | chr2:178723076;178723075;178723074 | chr2:179587803;179587802;179587801 |
N2A | 6067 | 18424;18425;18426 | chr2:178723076;178723075;178723074 | chr2:179587803;179587802;179587801 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs746715340 | -0.436 | 0.948 | N | 0.472 | 0.364 | 0.306053231325 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
D/E | rs746715340 | -0.436 | 0.948 | N | 0.472 | 0.364 | 0.306053231325 | gnomAD-4.0.0 | 1.59181E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85927E-06 | 0 | 0 |
D/N | rs1205648849 | -0.783 | 0.989 | N | 0.597 | 0.402 | 0.366277470483 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66445E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3456 | ambiguous | 0.3678 | ambiguous | -0.239 | Destabilizing | 0.978 | D | 0.645 | neutral | N | 0.49078606 | None | None | I |
D/C | 0.8744 | likely_pathogenic | 0.9015 | pathogenic | -0.09 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
D/E | 0.4745 | ambiguous | 0.5153 | ambiguous | -0.546 | Destabilizing | 0.948 | D | 0.472 | neutral | N | 0.498770609 | None | None | I |
D/F | 0.9148 | likely_pathogenic | 0.9354 | pathogenic | 0.395 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
D/G | 0.3496 | ambiguous | 0.3762 | ambiguous | -0.643 | Destabilizing | 0.989 | D | 0.581 | neutral | N | 0.506572196 | None | None | I |
D/H | 0.7385 | likely_pathogenic | 0.7557 | pathogenic | 0.11 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.540805697 | None | None | I |
D/I | 0.8254 | likely_pathogenic | 0.8751 | pathogenic | 0.841 | Stabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | I |
D/K | 0.8458 | likely_pathogenic | 0.8507 | pathogenic | -0.222 | Destabilizing | 0.983 | D | 0.665 | neutral | None | None | None | None | I |
D/L | 0.8318 | likely_pathogenic | 0.8634 | pathogenic | 0.841 | Stabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | I |
D/M | 0.9146 | likely_pathogenic | 0.937 | pathogenic | 1.16 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
D/N | 0.2689 | likely_benign | 0.2921 | benign | -0.783 | Destabilizing | 0.989 | D | 0.597 | neutral | N | 0.507697832 | None | None | I |
D/P | 0.9875 | likely_pathogenic | 0.9898 | pathogenic | 0.508 | Stabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | I |
D/Q | 0.7708 | likely_pathogenic | 0.7756 | pathogenic | -0.578 | Destabilizing | 0.914 | D | 0.33 | neutral | None | None | None | None | I |
D/R | 0.8722 | likely_pathogenic | 0.8664 | pathogenic | -0.025 | Destabilizing | 0.998 | D | 0.788 | deleterious | None | None | None | None | I |
D/S | 0.273 | likely_benign | 0.2837 | benign | -1.071 | Destabilizing | 0.914 | D | 0.281 | neutral | None | None | None | None | I |
D/T | 0.6082 | likely_pathogenic | 0.6392 | pathogenic | -0.73 | Destabilizing | 0.983 | D | 0.673 | neutral | None | None | None | None | I |
D/V | 0.5848 | likely_pathogenic | 0.6567 | pathogenic | 0.508 | Stabilizing | 0.998 | D | 0.786 | deleterious | D | 0.525071992 | None | None | I |
D/W | 0.988 | likely_pathogenic | 0.9899 | pathogenic | 0.558 | Stabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
D/Y | 0.6787 | likely_pathogenic | 0.7257 | pathogenic | 0.657 | Stabilizing | 0.999 | D | 0.799 | deleterious | D | 0.541059186 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.