Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7313 | 22162;22163;22164 | chr2:178723070;178723069;178723068 | chr2:179587797;179587796;179587795 |
N2AB | 6996 | 21211;21212;21213 | chr2:178723070;178723069;178723068 | chr2:179587797;179587796;179587795 |
N2A | 6069 | 18430;18431;18432 | chr2:178723070;178723069;178723068 | chr2:179587797;179587796;179587795 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 0.983 | N | 0.817 | 0.382 | 0.793123502946 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4936 | ambiguous | 0.5493 | ambiguous | -1.651 | Destabilizing | 0.415 | N | 0.583 | neutral | None | None | None | None | I |
C/D | 0.902 | likely_pathogenic | 0.9232 | pathogenic | 0.05 | Stabilizing | 0.923 | D | 0.827 | deleterious | None | None | None | None | I |
C/E | 0.9482 | likely_pathogenic | 0.9595 | pathogenic | 0.158 | Stabilizing | 0.923 | D | 0.831 | deleterious | None | None | None | None | I |
C/F | 0.5732 | likely_pathogenic | 0.6144 | pathogenic | -0.978 | Destabilizing | 0.949 | D | 0.815 | deleterious | N | 0.520028416 | None | None | I |
C/G | 0.3159 | likely_benign | 0.3506 | ambiguous | -1.962 | Destabilizing | 0.565 | D | 0.775 | deleterious | N | 0.513280466 | None | None | I |
C/H | 0.8938 | likely_pathogenic | 0.9131 | pathogenic | -1.891 | Destabilizing | 0.989 | D | 0.814 | deleterious | None | None | None | None | I |
C/I | 0.7554 | likely_pathogenic | 0.7968 | pathogenic | -0.852 | Destabilizing | 0.961 | D | 0.817 | deleterious | None | None | None | None | I |
C/K | 0.9764 | likely_pathogenic | 0.9815 | pathogenic | -0.706 | Destabilizing | 0.858 | D | 0.827 | deleterious | None | None | None | None | I |
C/L | 0.7592 | likely_pathogenic | 0.7758 | pathogenic | -0.852 | Destabilizing | 0.775 | D | 0.729 | prob.delet. | None | None | None | None | I |
C/M | 0.8506 | likely_pathogenic | 0.8767 | pathogenic | -0.005 | Destabilizing | 0.996 | D | 0.786 | deleterious | None | None | None | None | I |
C/N | 0.8481 | likely_pathogenic | 0.8729 | pathogenic | -0.696 | Destabilizing | 0.858 | D | 0.83 | deleterious | None | None | None | None | I |
C/P | 0.9908 | likely_pathogenic | 0.9916 | pathogenic | -1.093 | Destabilizing | 0.961 | D | 0.846 | deleterious | None | None | None | None | I |
C/Q | 0.9117 | likely_pathogenic | 0.9258 | pathogenic | -0.568 | Destabilizing | 0.923 | D | 0.851 | deleterious | None | None | None | None | I |
C/R | 0.8734 | likely_pathogenic | 0.8835 | pathogenic | -0.641 | Destabilizing | 0.901 | D | 0.848 | deleterious | N | 0.512519997 | None | None | I |
C/S | 0.3435 | ambiguous | 0.3981 | ambiguous | -1.293 | Destabilizing | 0.014 | N | 0.453 | neutral | N | 0.458020281 | None | None | I |
C/T | 0.5143 | ambiguous | 0.5813 | pathogenic | -0.994 | Destabilizing | 0.633 | D | 0.725 | prob.delet. | None | None | None | None | I |
C/V | 0.6463 | likely_pathogenic | 0.6874 | pathogenic | -1.093 | Destabilizing | 0.775 | D | 0.777 | deleterious | None | None | None | None | I |
C/W | 0.8772 | likely_pathogenic | 0.8976 | pathogenic | -0.955 | Destabilizing | 0.995 | D | 0.785 | deleterious | N | 0.520788884 | None | None | I |
C/Y | 0.7955 | likely_pathogenic | 0.8324 | pathogenic | -0.937 | Destabilizing | 0.983 | D | 0.817 | deleterious | N | 0.520281905 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.