Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7318 | 22177;22178;22179 | chr2:178723055;178723054;178723053 | chr2:179587782;179587781;179587780 |
N2AB | 7001 | 21226;21227;21228 | chr2:178723055;178723054;178723053 | chr2:179587782;179587781;179587780 |
N2A | 6074 | 18445;18446;18447 | chr2:178723055;178723054;178723053 | chr2:179587782;179587781;179587780 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.896 | N | 0.449 | 0.255 | 0.148003135375 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0903 | likely_benign | 0.0963 | benign | -0.331 | Destabilizing | 0.016 | N | 0.143 | neutral | N | 0.46331221 | None | None | N |
S/C | 0.1426 | likely_benign | 0.1486 | benign | -0.327 | Destabilizing | 0.99 | D | 0.444 | neutral | N | 0.464579657 | None | None | N |
S/D | 0.3574 | ambiguous | 0.3808 | ambiguous | 0.5 | Stabilizing | 0.617 | D | 0.392 | neutral | None | None | None | None | N |
S/E | 0.4129 | ambiguous | 0.4506 | ambiguous | 0.418 | Stabilizing | 0.617 | D | 0.395 | neutral | None | None | None | None | N |
S/F | 0.1204 | likely_benign | 0.1306 | benign | -0.935 | Destabilizing | 0.009 | N | 0.265 | neutral | N | 0.506135862 | None | None | N |
S/G | 0.1591 | likely_benign | 0.1638 | benign | -0.444 | Destabilizing | 0.617 | D | 0.373 | neutral | None | None | None | None | N |
S/H | 0.2607 | likely_benign | 0.2745 | benign | -0.933 | Destabilizing | 0.992 | D | 0.436 | neutral | None | None | None | None | N |
S/I | 0.1736 | likely_benign | 0.1914 | benign | -0.168 | Destabilizing | 0.739 | D | 0.428 | neutral | None | None | None | None | N |
S/K | 0.5258 | ambiguous | 0.5506 | ambiguous | -0.292 | Destabilizing | 0.617 | D | 0.4 | neutral | None | None | None | None | N |
S/L | 0.0984 | likely_benign | 0.1048 | benign | -0.168 | Destabilizing | 0.447 | N | 0.367 | neutral | None | None | None | None | N |
S/M | 0.1984 | likely_benign | 0.2166 | benign | -0.056 | Destabilizing | 0.977 | D | 0.436 | neutral | None | None | None | None | N |
S/N | 0.1548 | likely_benign | 0.1704 | benign | -0.099 | Destabilizing | 0.617 | D | 0.452 | neutral | None | None | None | None | N |
S/P | 0.8065 | likely_pathogenic | 0.8093 | pathogenic | -0.194 | Destabilizing | 0.896 | D | 0.449 | neutral | N | 0.475847057 | None | None | N |
S/Q | 0.4027 | ambiguous | 0.4352 | ambiguous | -0.288 | Destabilizing | 0.92 | D | 0.462 | neutral | None | None | None | None | N |
S/R | 0.4436 | ambiguous | 0.46 | ambiguous | -0.178 | Destabilizing | 0.85 | D | 0.445 | neutral | None | None | None | None | N |
S/T | 0.0774 | likely_benign | 0.0806 | benign | -0.216 | Destabilizing | 0.007 | N | 0.124 | neutral | N | 0.429019086 | None | None | N |
S/V | 0.1697 | likely_benign | 0.1882 | benign | -0.194 | Destabilizing | 0.447 | N | 0.359 | neutral | None | None | None | None | N |
S/W | 0.2632 | likely_benign | 0.2711 | benign | -0.949 | Destabilizing | 0.992 | D | 0.501 | neutral | None | None | None | None | N |
S/Y | 0.1131 | likely_benign | 0.1187 | benign | -0.644 | Destabilizing | 0.681 | D | 0.459 | neutral | N | 0.474833099 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.