Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7332 | 22219;22220;22221 | chr2:178722905;178722904;178722903 | chr2:179587632;179587631;179587630 |
N2AB | 7015 | 21268;21269;21270 | chr2:178722905;178722904;178722903 | chr2:179587632;179587631;179587630 |
N2A | 6088 | 18487;18488;18489 | chr2:178722905;178722904;178722903 | chr2:179587632;179587631;179587630 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | rs369522109 | -0.529 | 0.966 | N | 0.351 | 0.509 | None | gnomAD-2.1.1 | 2.43E-05 | None | None | None | None | I | None | 3.89257E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/Q | rs369522109 | -0.529 | 0.966 | N | 0.351 | 0.509 | None | gnomAD-3.1.2 | 8.54E-05 | None | None | None | None | I | None | 2.89436E-04 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/Q | rs369522109 | -0.529 | 0.966 | N | 0.351 | 0.509 | None | gnomAD-4.0.0 | 1.36422E-05 | None | None | None | None | I | None | 2.80404E-04 | 1.67017E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1114 | likely_benign | 0.1589 | benign | -1.899 | Destabilizing | 0.067 | N | 0.207 | neutral | None | None | None | None | I |
L/C | 0.3449 | ambiguous | 0.4726 | ambiguous | -1.161 | Destabilizing | 0.998 | D | 0.263 | neutral | None | None | None | None | I |
L/D | 0.475 | ambiguous | 0.6819 | pathogenic | -1.451 | Destabilizing | 0.949 | D | 0.411 | neutral | None | None | None | None | I |
L/E | 0.1708 | likely_benign | 0.246 | benign | -1.339 | Destabilizing | 0.949 | D | 0.429 | neutral | None | None | None | None | I |
L/F | 0.0908 | likely_benign | 0.1211 | benign | -1.102 | Destabilizing | 0.949 | D | 0.253 | neutral | None | None | None | None | I |
L/G | 0.3306 | likely_benign | 0.5114 | ambiguous | -2.328 | Highly Destabilizing | 0.842 | D | 0.412 | neutral | None | None | None | None | I |
L/H | 0.1185 | likely_benign | 0.1824 | benign | -1.503 | Destabilizing | 0.998 | D | 0.346 | neutral | None | None | None | None | I |
L/I | 0.0672 | likely_benign | 0.0739 | benign | -0.732 | Destabilizing | 0.007 | N | 0.11 | neutral | None | None | None | None | I |
L/K | 0.1173 | likely_benign | 0.1606 | benign | -1.372 | Destabilizing | 0.842 | D | 0.397 | neutral | None | None | None | None | I |
L/M | 0.0828 | likely_benign | 0.0887 | benign | -0.636 | Destabilizing | 0.267 | N | 0.224 | neutral | N | 0.45152117 | None | None | I |
L/N | 0.2711 | likely_benign | 0.4091 | ambiguous | -1.391 | Destabilizing | 0.949 | D | 0.397 | neutral | None | None | None | None | I |
L/P | 0.497 | ambiguous | 0.7791 | pathogenic | -1.093 | Destabilizing | 0.966 | D | 0.397 | neutral | N | 0.518015521 | None | None | I |
L/Q | 0.0734 | likely_benign | 0.0974 | benign | -1.404 | Destabilizing | 0.966 | D | 0.351 | neutral | N | 0.450251734 | None | None | I |
L/R | 0.0814 | likely_benign | 0.1233 | benign | -0.942 | Destabilizing | 0.966 | D | 0.362 | neutral | N | 0.445480632 | None | None | I |
L/S | 0.1293 | likely_benign | 0.2068 | benign | -2.07 | Highly Destabilizing | 0.172 | N | 0.196 | neutral | None | None | None | None | I |
L/T | 0.0992 | likely_benign | 0.132 | benign | -1.82 | Destabilizing | 0.728 | D | 0.269 | neutral | None | None | None | None | I |
L/V | 0.0625 | likely_benign | 0.066 | benign | -1.093 | Destabilizing | 0.022 | N | 0.097 | neutral | N | 0.393795444 | None | None | I |
L/W | 0.1459 | likely_benign | 0.2317 | benign | -1.283 | Destabilizing | 0.998 | D | 0.368 | neutral | None | None | None | None | I |
L/Y | 0.2285 | likely_benign | 0.3369 | benign | -1.02 | Destabilizing | 0.991 | D | 0.286 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.