Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7336 | 22231;22232;22233 | chr2:178722893;178722892;178722891 | chr2:179587620;179587619;179587618 |
N2AB | 7019 | 21280;21281;21282 | chr2:178722893;178722892;178722891 | chr2:179587620;179587619;179587618 |
N2A | 6092 | 18499;18500;18501 | chr2:178722893;178722892;178722891 | chr2:179587620;179587619;179587618 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1323509026 | -0.335 | 0.012 | N | 0.095 | 0.167 | 0.176091768786 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0882 | likely_benign | 0.1036 | benign | -0.973 | Destabilizing | 0.012 | N | 0.095 | neutral | N | 0.407377164 | None | None | I |
V/C | 0.7734 | likely_pathogenic | 0.7858 | pathogenic | -0.682 | Destabilizing | 0.996 | D | 0.305 | neutral | None | None | None | None | I |
V/D | 0.3116 | likely_benign | 0.3765 | ambiguous | -0.64 | Destabilizing | 0.939 | D | 0.379 | neutral | N | 0.476874535 | None | None | I |
V/E | 0.2016 | likely_benign | 0.2498 | benign | -0.721 | Destabilizing | 0.742 | D | 0.388 | neutral | None | None | None | None | I |
V/F | 0.1427 | likely_benign | 0.1629 | benign | -0.986 | Destabilizing | 0.007 | N | 0.232 | neutral | N | 0.453858916 | None | None | I |
V/G | 0.1856 | likely_benign | 0.2373 | benign | -1.186 | Destabilizing | 0.521 | D | 0.431 | neutral | N | 0.462506197 | None | None | I |
V/H | 0.5144 | ambiguous | 0.5785 | pathogenic | -0.708 | Destabilizing | 0.996 | D | 0.338 | neutral | None | None | None | None | I |
V/I | 0.065 | likely_benign | 0.0646 | benign | -0.531 | Destabilizing | 0.007 | N | 0.234 | neutral | N | 0.43004338 | None | None | I |
V/K | 0.2805 | likely_benign | 0.3339 | benign | -0.8 | Destabilizing | 0.59 | D | 0.407 | neutral | None | None | None | None | I |
V/L | 0.1406 | likely_benign | 0.1511 | benign | -0.531 | Destabilizing | 0.134 | N | 0.317 | neutral | N | 0.453592243 | None | None | I |
V/M | 0.1105 | likely_benign | 0.1244 | benign | -0.388 | Destabilizing | 0.91 | D | 0.29 | neutral | None | None | None | None | I |
V/N | 0.2298 | likely_benign | 0.2776 | benign | -0.479 | Destabilizing | 0.953 | D | 0.375 | neutral | None | None | None | None | I |
V/P | 0.3113 | likely_benign | 0.3487 | ambiguous | -0.642 | Destabilizing | 0.953 | D | 0.361 | neutral | None | None | None | None | I |
V/Q | 0.2639 | likely_benign | 0.3099 | benign | -0.725 | Destabilizing | 0.91 | D | 0.351 | neutral | None | None | None | None | I |
V/R | 0.2493 | likely_benign | 0.3 | benign | -0.226 | Destabilizing | 0.02 | N | 0.372 | neutral | None | None | None | None | I |
V/S | 0.1416 | likely_benign | 0.1723 | benign | -0.919 | Destabilizing | 0.59 | D | 0.416 | neutral | None | None | None | None | I |
V/T | 0.1154 | likely_benign | 0.1287 | benign | -0.895 | Destabilizing | 0.742 | D | 0.339 | neutral | None | None | None | None | I |
V/W | 0.7419 | likely_pathogenic | 0.7885 | pathogenic | -1.08 | Destabilizing | 0.996 | D | 0.358 | neutral | None | None | None | None | I |
V/Y | 0.5135 | ambiguous | 0.5654 | pathogenic | -0.798 | Destabilizing | 0.835 | D | 0.345 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.