Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7338 | 22237;22238;22239 | chr2:178722887;178722886;178722885 | chr2:179587614;179587613;179587612 |
N2AB | 7021 | 21286;21287;21288 | chr2:178722887;178722886;178722885 | chr2:179587614;179587613;179587612 |
N2A | 6094 | 18505;18506;18507 | chr2:178722887;178722886;178722885 | chr2:179587614;179587613;179587612 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs773799312 | 0.118 | 0.801 | N | 0.397 | 0.146 | 0.128392430309 | gnomAD-2.1.1 | 2.43E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 3.37952E-04 | None | 0 | None | 0 | 0 | 0 |
D/N | rs773799312 | 0.118 | 0.801 | N | 0.397 | 0.146 | 0.128392430309 | gnomAD-4.0.0 | 1.43404E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.50153E-04 | None | 0 | 0 | 0 | 0 | 0 |
D/V | rs770976572 | 0.119 | 0.669 | N | 0.423 | 0.255 | 0.453588565359 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
D/V | rs770976572 | 0.119 | 0.669 | N | 0.423 | 0.255 | 0.453588565359 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2077 | likely_benign | 0.2928 | benign | -0.371 | Destabilizing | 0.454 | N | 0.365 | neutral | N | 0.50679201 | None | None | I |
D/C | 0.708 | likely_pathogenic | 0.8507 | pathogenic | 0.131 | Stabilizing | 0.998 | D | 0.471 | neutral | None | None | None | None | I |
D/E | 0.17 | likely_benign | 0.1991 | benign | -0.335 | Destabilizing | 0.669 | D | 0.381 | neutral | N | 0.42738429 | None | None | I |
D/F | 0.5908 | likely_pathogenic | 0.7362 | pathogenic | -0.295 | Destabilizing | 0.949 | D | 0.441 | neutral | None | None | None | None | I |
D/G | 0.229 | likely_benign | 0.3337 | benign | -0.586 | Destabilizing | 0.012 | N | 0.273 | neutral | N | 0.487704817 | None | None | I |
D/H | 0.3403 | ambiguous | 0.4481 | ambiguous | -0.23 | Destabilizing | 0.991 | D | 0.284 | neutral | N | 0.511083109 | None | None | I |
D/I | 0.4216 | ambiguous | 0.5751 | pathogenic | 0.155 | Stabilizing | 0.904 | D | 0.443 | neutral | None | None | None | None | I |
D/K | 0.4108 | ambiguous | 0.5295 | ambiguous | 0.433 | Stabilizing | 0.728 | D | 0.309 | neutral | None | None | None | None | I |
D/L | 0.4602 | ambiguous | 0.6081 | pathogenic | 0.155 | Stabilizing | 0.037 | N | 0.359 | neutral | None | None | None | None | I |
D/M | 0.6274 | likely_pathogenic | 0.7561 | pathogenic | 0.398 | Stabilizing | 0.986 | D | 0.429 | neutral | None | None | None | None | I |
D/N | 0.1034 | likely_benign | 0.1267 | benign | 0.036 | Stabilizing | 0.801 | D | 0.397 | neutral | N | 0.505367858 | None | None | I |
D/P | 0.9218 | likely_pathogenic | 0.9618 | pathogenic | 0.002 | Stabilizing | 0.974 | D | 0.292 | neutral | None | None | None | None | I |
D/Q | 0.3406 | ambiguous | 0.431 | ambiguous | 0.073 | Stabilizing | 0.325 | N | 0.326 | neutral | None | None | None | None | I |
D/R | 0.4679 | ambiguous | 0.5991 | pathogenic | 0.529 | Stabilizing | 0.949 | D | 0.405 | neutral | None | None | None | None | I |
D/S | 0.1278 | likely_benign | 0.1672 | benign | -0.06 | Destabilizing | 0.067 | N | 0.32 | neutral | None | None | None | None | I |
D/T | 0.2832 | likely_benign | 0.3978 | ambiguous | 0.115 | Stabilizing | 0.728 | D | 0.316 | neutral | None | None | None | None | I |
D/V | 0.2636 | likely_benign | 0.3723 | ambiguous | 0.002 | Stabilizing | 0.669 | D | 0.423 | neutral | N | 0.468444452 | None | None | I |
D/W | 0.9172 | likely_pathogenic | 0.9562 | pathogenic | -0.134 | Destabilizing | 0.998 | D | 0.551 | neutral | None | None | None | None | I |
D/Y | 0.2479 | likely_benign | 0.3477 | ambiguous | -0.038 | Destabilizing | 0.989 | D | 0.439 | neutral | N | 0.510083031 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.