Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC733922240;22241;22242 chr2:178722884;178722883;178722882chr2:179587611;179587610;179587609
N2AB702221289;21290;21291 chr2:178722884;178722883;178722882chr2:179587611;179587610;179587609
N2A609518508;18509;18510 chr2:178722884;178722883;178722882chr2:179587611;179587610;179587609
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: S
  • RefSeq wild type transcript codon: TCG
  • RefSeq wild type template codon: AGC
  • Domain: Ig-58
  • Domain position: 17
  • Structural Position: 26
  • Q(SASA): 0.5193
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
S/L rs72648966 -0.284 0.064 N 0.382 0.146 None gnomAD-2.1.1 2.02E-05 None None None None I None 0 0 None 0 5.63E-05 None 0 None 0 2.68E-05 1.67448E-04
S/L rs72648966 -0.284 0.064 N 0.382 0.146 None gnomAD-3.1.2 1.32E-05 None None None None I None 0 0 0 0 0 None 0 0 2.94E-05 0 0
S/L rs72648966 -0.284 0.064 N 0.382 0.146 None gnomAD-4.0.0 9.92094E-06 None None None None I None 0 0 None 0 0 None 0 1.64636E-04 1.27187E-05 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
S/A 0.0684 likely_benign 0.0817 benign -0.295 Destabilizing None N 0.158 neutral N 0.458115415 None None I
S/C 0.1532 likely_benign 0.2239 benign -0.276 Destabilizing 0.676 D 0.391 neutral None None None None I
S/D 0.3948 ambiguous 0.557 ambiguous 0.214 Stabilizing 0.038 N 0.22 neutral None None None None I
S/E 0.5263 ambiguous 0.6735 pathogenic 0.131 Stabilizing 0.072 N 0.22 neutral None None None None I
S/F 0.1555 likely_benign 0.241 benign -0.829 Destabilizing 0.12 N 0.468 neutral None None None None I
S/G 0.1214 likely_benign 0.1636 benign -0.426 Destabilizing 0.016 N 0.3 neutral None None None None I
S/H 0.3373 likely_benign 0.4643 ambiguous -0.894 Destabilizing 0.214 N 0.402 neutral None None None None I
S/I 0.1572 likely_benign 0.2328 benign -0.082 Destabilizing 0.038 N 0.415 neutral None None None None I
S/K 0.6187 likely_pathogenic 0.7881 pathogenic -0.436 Destabilizing 0.072 N 0.225 neutral None None None None I
S/L 0.0916 likely_benign 0.1233 benign -0.082 Destabilizing 0.064 N 0.382 neutral N 0.495094936 None None I
S/M 0.2013 likely_benign 0.2551 benign 0.083 Stabilizing 0.356 N 0.403 neutral None None None None I
S/N 0.1573 likely_benign 0.2088 benign -0.189 Destabilizing 0.001 N 0.199 neutral None None None None I
S/P 0.1074 likely_benign 0.1481 benign -0.123 Destabilizing 0.295 N 0.445 neutral N 0.441721811 None None I
S/Q 0.4845 ambiguous 0.6171 pathogenic -0.418 Destabilizing 0.356 N 0.349 neutral None None None None I
S/R 0.5208 ambiguous 0.7031 pathogenic -0.232 Destabilizing 0.214 N 0.444 neutral None None None None I
S/T 0.0826 likely_benign 0.0976 benign -0.29 Destabilizing None N 0.175 neutral N 0.449493145 None None I
S/V 0.1496 likely_benign 0.2117 benign -0.123 Destabilizing 0.001 N 0.271 neutral None None None None I
S/W 0.3302 likely_benign 0.4842 ambiguous -0.845 Destabilizing 0.8 D 0.441 neutral N 0.495614062 None None I
S/Y 0.1431 likely_benign 0.2199 benign -0.554 Destabilizing None N 0.29 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.