Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7339 | 22240;22241;22242 | chr2:178722884;178722883;178722882 | chr2:179587611;179587610;179587609 |
N2AB | 7022 | 21289;21290;21291 | chr2:178722884;178722883;178722882 | chr2:179587611;179587610;179587609 |
N2A | 6095 | 18508;18509;18510 | chr2:178722884;178722883;178722882 | chr2:179587611;179587610;179587609 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs72648966 | -0.284 | 0.064 | N | 0.382 | 0.146 | None | gnomAD-2.1.1 | 2.02E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.63E-05 | None | 0 | None | 0 | 2.68E-05 | 1.67448E-04 |
S/L | rs72648966 | -0.284 | 0.064 | N | 0.382 | 0.146 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
S/L | rs72648966 | -0.284 | 0.064 | N | 0.382 | 0.146 | None | gnomAD-4.0.0 | 9.92094E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.64636E-04 | 1.27187E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0684 | likely_benign | 0.0817 | benign | -0.295 | Destabilizing | None | N | 0.158 | neutral | N | 0.458115415 | None | None | I |
S/C | 0.1532 | likely_benign | 0.2239 | benign | -0.276 | Destabilizing | 0.676 | D | 0.391 | neutral | None | None | None | None | I |
S/D | 0.3948 | ambiguous | 0.557 | ambiguous | 0.214 | Stabilizing | 0.038 | N | 0.22 | neutral | None | None | None | None | I |
S/E | 0.5263 | ambiguous | 0.6735 | pathogenic | 0.131 | Stabilizing | 0.072 | N | 0.22 | neutral | None | None | None | None | I |
S/F | 0.1555 | likely_benign | 0.241 | benign | -0.829 | Destabilizing | 0.12 | N | 0.468 | neutral | None | None | None | None | I |
S/G | 0.1214 | likely_benign | 0.1636 | benign | -0.426 | Destabilizing | 0.016 | N | 0.3 | neutral | None | None | None | None | I |
S/H | 0.3373 | likely_benign | 0.4643 | ambiguous | -0.894 | Destabilizing | 0.214 | N | 0.402 | neutral | None | None | None | None | I |
S/I | 0.1572 | likely_benign | 0.2328 | benign | -0.082 | Destabilizing | 0.038 | N | 0.415 | neutral | None | None | None | None | I |
S/K | 0.6187 | likely_pathogenic | 0.7881 | pathogenic | -0.436 | Destabilizing | 0.072 | N | 0.225 | neutral | None | None | None | None | I |
S/L | 0.0916 | likely_benign | 0.1233 | benign | -0.082 | Destabilizing | 0.064 | N | 0.382 | neutral | N | 0.495094936 | None | None | I |
S/M | 0.2013 | likely_benign | 0.2551 | benign | 0.083 | Stabilizing | 0.356 | N | 0.403 | neutral | None | None | None | None | I |
S/N | 0.1573 | likely_benign | 0.2088 | benign | -0.189 | Destabilizing | 0.001 | N | 0.199 | neutral | None | None | None | None | I |
S/P | 0.1074 | likely_benign | 0.1481 | benign | -0.123 | Destabilizing | 0.295 | N | 0.445 | neutral | N | 0.441721811 | None | None | I |
S/Q | 0.4845 | ambiguous | 0.6171 | pathogenic | -0.418 | Destabilizing | 0.356 | N | 0.349 | neutral | None | None | None | None | I |
S/R | 0.5208 | ambiguous | 0.7031 | pathogenic | -0.232 | Destabilizing | 0.214 | N | 0.444 | neutral | None | None | None | None | I |
S/T | 0.0826 | likely_benign | 0.0976 | benign | -0.29 | Destabilizing | None | N | 0.175 | neutral | N | 0.449493145 | None | None | I |
S/V | 0.1496 | likely_benign | 0.2117 | benign | -0.123 | Destabilizing | 0.001 | N | 0.271 | neutral | None | None | None | None | I |
S/W | 0.3302 | likely_benign | 0.4842 | ambiguous | -0.845 | Destabilizing | 0.8 | D | 0.441 | neutral | N | 0.495614062 | None | None | I |
S/Y | 0.1431 | likely_benign | 0.2199 | benign | -0.554 | Destabilizing | None | N | 0.29 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.