Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7341 | 22246;22247;22248 | chr2:178722878;178722877;178722876 | chr2:179587605;179587604;179587603 |
N2AB | 7024 | 21295;21296;21297 | chr2:178722878;178722877;178722876 | chr2:179587605;179587604;179587603 |
N2A | 6097 | 18514;18515;18516 | chr2:178722878;178722877;178722876 | chr2:179587605;179587604;179587603 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | rs1474346427 | -0.415 | 0.975 | N | 0.543 | 0.259 | 0.467501455318 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
S/Y | rs1474346427 | -0.415 | 0.975 | N | 0.543 | 0.259 | 0.467501455318 | gnomAD-4.0.0 | 1.59317E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86097E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0916 | likely_benign | 0.1193 | benign | -0.515 | Destabilizing | 0.139 | N | 0.409 | neutral | N | 0.450647939 | None | None | N |
S/C | 0.1507 | likely_benign | 0.2175 | benign | -0.376 | Destabilizing | 0.013 | N | 0.406 | neutral | N | 0.457805984 | None | None | N |
S/D | 0.5952 | likely_pathogenic | 0.8224 | pathogenic | 0.44 | Stabilizing | 0.704 | D | 0.425 | neutral | None | None | None | None | N |
S/E | 0.6334 | likely_pathogenic | 0.8155 | pathogenic | 0.471 | Stabilizing | 0.704 | D | 0.453 | neutral | None | None | None | None | N |
S/F | 0.1769 | likely_benign | 0.3401 | ambiguous | -0.796 | Destabilizing | 0.927 | D | 0.547 | neutral | N | 0.471023211 | None | None | N |
S/G | 0.1497 | likely_benign | 0.2351 | benign | -0.766 | Destabilizing | 0.495 | N | 0.477 | neutral | None | None | None | None | N |
S/H | 0.3867 | ambiguous | 0.5655 | pathogenic | -1.081 | Destabilizing | 0.981 | D | 0.534 | neutral | None | None | None | None | N |
S/I | 0.158 | likely_benign | 0.277 | benign | 0.047 | Stabilizing | 0.543 | D | 0.517 | neutral | None | None | None | None | N |
S/K | 0.6948 | likely_pathogenic | 0.8817 | pathogenic | -0.136 | Destabilizing | 0.543 | D | 0.465 | neutral | None | None | None | None | N |
S/L | 0.0953 | likely_benign | 0.155 | benign | 0.047 | Stabilizing | 0.329 | N | 0.474 | neutral | None | None | None | None | N |
S/M | 0.2166 | likely_benign | 0.2915 | benign | -0.022 | Destabilizing | 0.944 | D | 0.539 | neutral | None | None | None | None | N |
S/N | 0.2041 | likely_benign | 0.3427 | ambiguous | -0.281 | Destabilizing | 0.704 | D | 0.445 | neutral | None | None | None | None | N |
S/P | 0.5674 | likely_pathogenic | 0.851 | pathogenic | -0.106 | Destabilizing | 0.927 | D | 0.561 | neutral | N | 0.461123391 | None | None | N |
S/Q | 0.5493 | ambiguous | 0.7138 | pathogenic | -0.278 | Destabilizing | 0.893 | D | 0.509 | neutral | None | None | None | None | N |
S/R | 0.5793 | likely_pathogenic | 0.812 | pathogenic | -0.169 | Destabilizing | 0.007 | N | 0.411 | neutral | None | None | None | None | N |
S/T | 0.083 | likely_benign | 0.1062 | benign | -0.299 | Destabilizing | 0.01 | N | 0.321 | neutral | N | 0.37256837 | None | None | N |
S/V | 0.1715 | likely_benign | 0.264 | benign | -0.106 | Destabilizing | 0.013 | N | 0.457 | neutral | None | None | None | None | N |
S/W | 0.3758 | ambiguous | 0.5849 | pathogenic | -0.83 | Destabilizing | 0.995 | D | 0.565 | neutral | None | None | None | None | N |
S/Y | 0.1809 | likely_benign | 0.3198 | benign | -0.477 | Destabilizing | 0.975 | D | 0.543 | neutral | N | 0.461056933 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.