Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7342 | 22249;22250;22251 | chr2:178722875;178722874;178722873 | chr2:179587602;179587601;179587600 |
N2AB | 7025 | 21298;21299;21300 | chr2:178722875;178722874;178722873 | chr2:179587602;179587601;179587600 |
N2A | 6098 | 18517;18518;18519 | chr2:178722875;178722874;178722873 | chr2:179587602;179587601;179587600 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1243764269 | -0.962 | 0.992 | D | 0.687 | 0.564 | 0.622959606287 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/V | rs1243764269 | -0.962 | 0.992 | D | 0.687 | 0.564 | 0.622959606287 | gnomAD-4.0.0 | 4.77925E-06 | None | None | None | None | N | None | 0 | 6.87096E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8396 | likely_pathogenic | 0.9459 | pathogenic | -1.803 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
L/C | 0.8576 | likely_pathogenic | 0.9496 | pathogenic | -1.247 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
L/D | 0.9959 | likely_pathogenic | 0.9993 | pathogenic | -2.609 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/E | 0.9698 | likely_pathogenic | 0.9946 | pathogenic | -2.33 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
L/F | 0.1284 | likely_benign | 0.2284 | benign | -1.138 | Destabilizing | 0.907 | D | 0.49 | neutral | D | 0.535502417 | None | None | N |
L/G | 0.9632 | likely_pathogenic | 0.9916 | pathogenic | -2.297 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
L/H | 0.8592 | likely_pathogenic | 0.9675 | pathogenic | -2.391 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/I | 0.1377 | likely_benign | 0.1909 | benign | -0.309 | Destabilizing | 0.99 | D | 0.671 | neutral | D | 0.54332022 | None | None | N |
L/K | 0.9325 | likely_pathogenic | 0.986 | pathogenic | -1.366 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/M | 0.1941 | likely_benign | 0.2585 | benign | -0.742 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
L/N | 0.9771 | likely_pathogenic | 0.9954 | pathogenic | -2.073 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
L/P | 0.9856 | likely_pathogenic | 0.9973 | pathogenic | -0.801 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/Q | 0.8324 | likely_pathogenic | 0.9624 | pathogenic | -1.648 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
L/R | 0.8593 | likely_pathogenic | 0.9709 | pathogenic | -1.815 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/S | 0.9375 | likely_pathogenic | 0.9873 | pathogenic | -2.39 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.636811135 | None | None | N |
L/T | 0.8861 | likely_pathogenic | 0.9697 | pathogenic | -1.96 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
L/V | 0.1876 | likely_benign | 0.2864 | benign | -0.801 | Destabilizing | 0.992 | D | 0.687 | prob.neutral | D | 0.574510646 | None | None | N |
L/W | 0.5493 | ambiguous | 0.8319 | pathogenic | -1.433 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/Y | 0.6881 | likely_pathogenic | 0.8786 | pathogenic | -1.262 | Destabilizing | 0.997 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.