Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7343 | 22252;22253;22254 | chr2:178722872;178722871;178722870 | chr2:179587599;179587598;179587597 |
N2AB | 7026 | 21301;21302;21303 | chr2:178722872;178722871;178722870 | chr2:179587599;179587598;179587597 |
N2A | 6099 | 18520;18521;18522 | chr2:178722872;178722871;178722870 | chr2:179587599;179587598;179587597 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | rs886043434 | None | 0.048 | N | 0.167 | 0.234 | 0.190952846119 | gnomAD-4.0.0 | 1.59307E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77932E-05 | None | 0 | 0 | 0 | 0 | 0 |
Q/R | rs1215230781 | None | 0.744 | N | 0.402 | 0.265 | 0.278968121808 | gnomAD-4.0.0 | 1.59294E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86059E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.297 | likely_benign | 0.3953 | ambiguous | -0.6 | Destabilizing | 0.924 | D | 0.426 | neutral | None | None | None | None | I |
Q/C | 0.6695 | likely_pathogenic | 0.7899 | pathogenic | 0.06 | Stabilizing | 0.999 | D | 0.511 | neutral | None | None | None | None | I |
Q/D | 0.5105 | ambiguous | 0.6628 | pathogenic | -0.147 | Destabilizing | 0.012 | N | 0.167 | neutral | None | None | None | None | I |
Q/E | 0.1095 | likely_benign | 0.129 | benign | -0.107 | Destabilizing | 0.017 | N | 0.174 | neutral | N | 0.385293391 | None | None | I |
Q/F | 0.6862 | likely_pathogenic | 0.8004 | pathogenic | -0.5 | Destabilizing | 0.992 | D | 0.525 | neutral | None | None | None | None | I |
Q/G | 0.3827 | ambiguous | 0.5384 | ambiguous | -0.89 | Destabilizing | 0.961 | D | 0.497 | neutral | None | None | None | None | I |
Q/H | 0.2051 | likely_benign | 0.2929 | benign | -0.71 | Destabilizing | 0.995 | D | 0.454 | neutral | N | 0.474165956 | None | None | I |
Q/I | 0.4099 | ambiguous | 0.4944 | ambiguous | 0.111 | Stabilizing | 0.136 | N | 0.401 | neutral | None | None | None | None | I |
Q/K | 0.0995 | likely_benign | 0.1232 | benign | -0.132 | Destabilizing | 0.048 | N | 0.167 | neutral | N | 0.422966345 | None | None | I |
Q/L | 0.1582 | likely_benign | 0.2245 | benign | 0.111 | Stabilizing | 0.647 | D | 0.472 | neutral | N | 0.483246799 | None | None | I |
Q/M | 0.4548 | ambiguous | 0.5337 | ambiguous | 0.536 | Stabilizing | 0.988 | D | 0.459 | neutral | None | None | None | None | I |
Q/N | 0.3674 | ambiguous | 0.4772 | ambiguous | -0.619 | Destabilizing | 0.899 | D | 0.373 | neutral | None | None | None | None | I |
Q/P | 0.3446 | ambiguous | 0.6567 | pathogenic | -0.096 | Destabilizing | 0.976 | D | 0.506 | neutral | N | 0.477763622 | None | None | I |
Q/R | 0.1005 | likely_benign | 0.1349 | benign | 0.006 | Stabilizing | 0.744 | D | 0.402 | neutral | N | 0.467642629 | None | None | I |
Q/S | 0.3034 | likely_benign | 0.3847 | ambiguous | -0.699 | Destabilizing | 0.924 | D | 0.4 | neutral | None | None | None | None | I |
Q/T | 0.2294 | likely_benign | 0.2827 | benign | -0.469 | Destabilizing | 0.699 | D | 0.471 | neutral | None | None | None | None | I |
Q/V | 0.2966 | likely_benign | 0.367 | ambiguous | -0.096 | Destabilizing | 0.422 | N | 0.471 | neutral | None | None | None | None | I |
Q/W | 0.5572 | ambiguous | 0.7448 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.536 | neutral | None | None | None | None | I |
Q/Y | 0.4775 | ambiguous | 0.6261 | pathogenic | -0.147 | Destabilizing | 0.997 | D | 0.527 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.