Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7345 | 22258;22259;22260 | chr2:178722866;178722865;178722864 | chr2:179587593;179587592;179587591 |
N2AB | 7028 | 21307;21308;21309 | chr2:178722866;178722865;178722864 | chr2:179587593;179587592;179587591 |
N2A | 6101 | 18526;18527;18528 | chr2:178722866;178722865;178722864 | chr2:179587593;179587592;179587591 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs1224196588 | -0.165 | 0.642 | N | 0.395 | 0.153 | 0.220303561663 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.66E-05 | 0 | 0 |
Q/R | rs1224196588 | -0.165 | 0.642 | N | 0.395 | 0.153 | 0.220303561663 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.41E-05 | 0 | 0 | 0 | 0 |
Q/R | rs1224196588 | -0.165 | 0.642 | N | 0.395 | 0.153 | 0.220303561663 | gnomAD-4.0.0 | 3.84653E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 4.71046E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.405 | ambiguous | 0.4281 | ambiguous | -0.616 | Destabilizing | 0.495 | N | 0.477 | neutral | None | None | None | None | N |
Q/C | 0.8104 | likely_pathogenic | 0.8326 | pathogenic | -0.168 | Destabilizing | 0.995 | D | 0.594 | neutral | None | None | None | None | N |
Q/D | 0.7187 | likely_pathogenic | 0.7389 | pathogenic | -1.242 | Destabilizing | 0.329 | N | 0.426 | neutral | None | None | None | None | N |
Q/E | 0.1122 | likely_benign | 0.1152 | benign | -1.117 | Destabilizing | 0.01 | N | 0.165 | neutral | N | 0.468218632 | None | None | N |
Q/F | 0.8274 | likely_pathogenic | 0.838 | pathogenic | -0.364 | Destabilizing | 0.944 | D | 0.607 | neutral | None | None | None | None | N |
Q/G | 0.5408 | ambiguous | 0.6079 | pathogenic | -0.989 | Destabilizing | 0.704 | D | 0.553 | neutral | None | None | None | None | N |
Q/H | 0.3209 | likely_benign | 0.3448 | ambiguous | -0.977 | Destabilizing | 0.002 | N | 0.153 | neutral | N | 0.500293765 | None | None | N |
Q/I | 0.544 | ambiguous | 0.5459 | ambiguous | 0.344 | Stabilizing | 0.893 | D | 0.614 | neutral | None | None | None | None | N |
Q/K | 0.1015 | likely_benign | 0.1107 | benign | -0.451 | Destabilizing | 0.425 | N | 0.425 | neutral | N | 0.415346939 | None | None | N |
Q/L | 0.219 | likely_benign | 0.2384 | benign | 0.344 | Stabilizing | 0.642 | D | 0.552 | neutral | N | 0.492020998 | None | None | N |
Q/M | 0.5172 | ambiguous | 0.5226 | ambiguous | 0.799 | Stabilizing | 0.981 | D | 0.535 | neutral | None | None | None | None | N |
Q/N | 0.5508 | ambiguous | 0.5547 | ambiguous | -1.112 | Destabilizing | 0.704 | D | 0.388 | neutral | None | None | None | None | N |
Q/P | 0.649 | likely_pathogenic | 0.7555 | pathogenic | 0.055 | Stabilizing | 0.917 | D | 0.575 | neutral | N | 0.513300347 | None | None | N |
Q/R | 0.1019 | likely_benign | 0.1206 | benign | -0.438 | Destabilizing | 0.642 | D | 0.395 | neutral | N | 0.469624141 | None | None | N |
Q/S | 0.4894 | ambiguous | 0.4947 | ambiguous | -1.164 | Destabilizing | 0.329 | N | 0.423 | neutral | None | None | None | None | N |
Q/T | 0.3528 | ambiguous | 0.34 | benign | -0.852 | Destabilizing | 0.031 | N | 0.259 | neutral | None | None | None | None | N |
Q/V | 0.3995 | ambiguous | 0.3986 | ambiguous | 0.055 | Stabilizing | 0.704 | D | 0.568 | neutral | None | None | None | None | N |
Q/W | 0.7257 | likely_pathogenic | 0.7815 | pathogenic | -0.33 | Destabilizing | 0.995 | D | 0.581 | neutral | None | None | None | None | N |
Q/Y | 0.6577 | likely_pathogenic | 0.6872 | pathogenic | -0.027 | Destabilizing | 0.704 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.