Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7355 | 22288;22289;22290 | chr2:178722836;178722835;178722834 | chr2:179587563;179587562;179587561 |
N2AB | 7038 | 21337;21338;21339 | chr2:178722836;178722835;178722834 | chr2:179587563;179587562;179587561 |
N2A | 6111 | 18556;18557;18558 | chr2:178722836;178722835;178722834 | chr2:179587563;179587562;179587561 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.979 | D | 0.702 | 0.606 | 0.519187973786 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0896 | likely_benign | 0.1034 | benign | -0.719 | Destabilizing | 0.472 | N | 0.592 | neutral | N | 0.518362237 | None | None | N |
S/C | 0.1441 | likely_benign | 0.1836 | benign | -0.388 | Destabilizing | 0.994 | D | 0.659 | neutral | N | 0.517402431 | None | None | N |
S/D | 0.5977 | likely_pathogenic | 0.7316 | pathogenic | -0.641 | Destabilizing | 0.854 | D | 0.663 | neutral | None | None | None | None | N |
S/E | 0.683 | likely_pathogenic | 0.7867 | pathogenic | -0.538 | Destabilizing | 0.742 | D | 0.646 | neutral | None | None | None | None | N |
S/F | 0.1338 | likely_benign | 0.1577 | benign | -0.531 | Destabilizing | 0.015 | N | 0.537 | neutral | N | 0.497234261 | None | None | N |
S/G | 0.1794 | likely_benign | 0.2131 | benign | -1.077 | Destabilizing | 0.854 | D | 0.63 | neutral | None | None | None | None | N |
S/H | 0.3886 | ambiguous | 0.4579 | ambiguous | -1.434 | Destabilizing | 0.91 | D | 0.682 | prob.neutral | None | None | None | None | N |
S/I | 0.1752 | likely_benign | 0.2302 | benign | 0.16 | Stabilizing | 0.835 | D | 0.694 | prob.neutral | None | None | None | None | N |
S/K | 0.8013 | likely_pathogenic | 0.8948 | pathogenic | -0.58 | Destabilizing | 0.037 | N | 0.488 | neutral | None | None | None | None | N |
S/L | 0.1069 | likely_benign | 0.1283 | benign | 0.16 | Stabilizing | 0.59 | D | 0.647 | neutral | None | None | None | None | N |
S/M | 0.2158 | likely_benign | 0.2337 | benign | 0.245 | Stabilizing | 0.953 | D | 0.675 | prob.neutral | None | None | None | None | N |
S/N | 0.2216 | likely_benign | 0.2613 | benign | -0.842 | Destabilizing | 0.854 | D | 0.655 | neutral | None | None | None | None | N |
S/P | 0.9251 | likely_pathogenic | 0.9736 | pathogenic | -0.097 | Destabilizing | 0.979 | D | 0.702 | prob.neutral | D | 0.534835123 | None | None | N |
S/Q | 0.5865 | likely_pathogenic | 0.673 | pathogenic | -0.753 | Destabilizing | 0.91 | D | 0.677 | prob.neutral | None | None | None | None | N |
S/R | 0.7048 | likely_pathogenic | 0.8324 | pathogenic | -0.718 | Destabilizing | 0.835 | D | 0.713 | prob.delet. | None | None | None | None | N |
S/T | 0.0941 | likely_benign | 0.1008 | benign | -0.695 | Destabilizing | 0.028 | N | 0.467 | neutral | N | 0.443960479 | None | None | N |
S/V | 0.1842 | likely_benign | 0.2274 | benign | -0.097 | Destabilizing | 0.742 | D | 0.67 | neutral | None | None | None | None | N |
S/W | 0.2929 | likely_benign | 0.36 | ambiguous | -0.662 | Destabilizing | 0.996 | D | 0.69 | prob.neutral | None | None | None | None | N |
S/Y | 0.152 | likely_benign | 0.1957 | benign | -0.321 | Destabilizing | 0.063 | N | 0.539 | neutral | N | 0.494271747 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.