Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7361 | 22306;22307;22308 | chr2:178722818;178722817;178722816 | chr2:179587545;179587544;179587543 |
N2AB | 7044 | 21355;21356;21357 | chr2:178722818;178722817;178722816 | chr2:179587545;179587544;179587543 |
N2A | 6117 | 18574;18575;18576 | chr2:178722818;178722817;178722816 | chr2:179587545;179587544;179587543 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.046 | N | 0.211 | 0.111 | 0.168933306366 | gnomAD-4.0.0 | 3.60098E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93751E-06 | 0 | 0 |
T/N | rs1425492375 | 0.018 | 0.623 | N | 0.267 | 0.204 | 0.350524144436 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
T/N | rs1425492375 | 0.018 | 0.623 | N | 0.267 | 0.204 | 0.350524144436 | gnomAD-4.0.0 | 4.7767E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77454E-05 | None | 0 | 0 | 2.85972E-06 | 1.43328E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0929 | likely_benign | 0.133 | benign | -0.52 | Destabilizing | 0.046 | N | 0.211 | neutral | N | 0.474683244 | None | None | N |
T/C | 0.5642 | likely_pathogenic | 0.7084 | pathogenic | -0.409 | Destabilizing | 0.998 | D | 0.343 | neutral | None | None | None | None | N |
T/D | 0.4395 | ambiguous | 0.6481 | pathogenic | 0.49 | Stabilizing | 0.686 | D | 0.327 | neutral | None | None | None | None | N |
T/E | 0.3049 | likely_benign | 0.4815 | ambiguous | 0.463 | Stabilizing | 0.879 | D | 0.337 | neutral | None | None | None | None | N |
T/F | 0.2712 | likely_benign | 0.4375 | ambiguous | -0.868 | Destabilizing | 0.079 | N | 0.267 | neutral | None | None | None | None | N |
T/G | 0.2667 | likely_benign | 0.3963 | ambiguous | -0.702 | Destabilizing | 0.024 | N | 0.24 | neutral | None | None | None | None | N |
T/H | 0.2745 | likely_benign | 0.42 | ambiguous | -0.852 | Destabilizing | 0.995 | D | 0.361 | neutral | None | None | None | None | N |
T/I | 0.1743 | likely_benign | 0.2901 | benign | -0.149 | Destabilizing | 0.794 | D | 0.329 | neutral | N | 0.460812657 | None | None | N |
T/K | 0.1965 | likely_benign | 0.321 | benign | -0.313 | Destabilizing | 0.12 | N | 0.211 | neutral | None | None | None | None | N |
T/L | 0.1165 | likely_benign | 0.1844 | benign | -0.149 | Destabilizing | 0.678 | D | 0.321 | neutral | None | None | None | None | N |
T/M | 0.095 | likely_benign | 0.1276 | benign | -0.181 | Destabilizing | 0.986 | D | 0.343 | neutral | None | None | None | None | N |
T/N | 0.1437 | likely_benign | 0.2284 | benign | -0.263 | Destabilizing | 0.623 | D | 0.267 | neutral | N | 0.478878343 | None | None | N |
T/P | 0.4655 | ambiguous | 0.6432 | pathogenic | -0.242 | Destabilizing | 0.922 | D | 0.359 | neutral | D | 0.522130474 | None | None | N |
T/Q | 0.2066 | likely_benign | 0.3116 | benign | -0.366 | Destabilizing | 0.944 | D | 0.361 | neutral | None | None | None | None | N |
T/R | 0.1506 | likely_benign | 0.2354 | benign | -0.102 | Destabilizing | 0.932 | D | 0.372 | neutral | None | None | None | None | N |
T/S | 0.1191 | likely_benign | 0.1783 | benign | -0.547 | Destabilizing | 0.02 | N | 0.205 | neutral | N | 0.446301777 | None | None | N |
T/V | 0.1396 | likely_benign | 0.2138 | benign | -0.242 | Destabilizing | 0.089 | N | 0.182 | neutral | None | None | None | None | N |
T/W | 0.6032 | likely_pathogenic | 0.7607 | pathogenic | -0.873 | Destabilizing | 1.0 | D | 0.371 | neutral | None | None | None | None | N |
T/Y | 0.3169 | likely_benign | 0.4867 | ambiguous | -0.583 | Destabilizing | 0.98 | D | 0.391 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.