Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7362 | 22309;22310;22311 | chr2:178722815;178722814;178722813 | chr2:179587542;179587541;179587540 |
N2AB | 7045 | 21358;21359;21360 | chr2:178722815;178722814;178722813 | chr2:179587542;179587541;179587540 |
N2A | 6118 | 18577;18578;18579 | chr2:178722815;178722814;178722813 | chr2:179587542;179587541;179587540 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.998 | N | 0.529 | 0.299 | 0.391313282164 | gnomAD-4.0.0 | 1.59219E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85964E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5766 | likely_pathogenic | 0.7258 | pathogenic | -0.341 | Destabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | N |
K/C | 0.8655 | likely_pathogenic | 0.9134 | pathogenic | -0.518 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/D | 0.9087 | likely_pathogenic | 0.957 | pathogenic | 0.205 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/E | 0.418 | ambiguous | 0.5884 | pathogenic | 0.297 | Stabilizing | 0.998 | D | 0.529 | neutral | N | 0.433914057 | None | None | N |
K/F | 0.896 | likely_pathogenic | 0.9482 | pathogenic | -0.161 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/G | 0.7896 | likely_pathogenic | 0.9001 | pathogenic | -0.644 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
K/H | 0.5574 | ambiguous | 0.658 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/I | 0.4811 | ambiguous | 0.6046 | pathogenic | 0.416 | Stabilizing | 0.993 | D | 0.718 | prob.delet. | N | 0.498909685 | None | None | N |
K/L | 0.4686 | ambiguous | 0.5803 | pathogenic | 0.416 | Stabilizing | 0.982 | D | 0.631 | neutral | None | None | None | None | N |
K/M | 0.3764 | ambiguous | 0.4896 | ambiguous | 0.005 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/N | 0.8206 | likely_pathogenic | 0.9058 | pathogenic | -0.227 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.48242008 | None | None | N |
K/P | 0.6525 | likely_pathogenic | 0.7666 | pathogenic | 0.193 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
K/Q | 0.2579 | likely_benign | 0.3464 | ambiguous | -0.248 | Destabilizing | 0.998 | D | 0.674 | neutral | N | 0.475262034 | None | None | N |
K/R | 0.09 | likely_benign | 0.101 | benign | -0.242 | Destabilizing | 0.996 | D | 0.489 | neutral | N | 0.495984023 | None | None | N |
K/S | 0.7623 | likely_pathogenic | 0.8737 | pathogenic | -0.817 | Destabilizing | 0.999 | D | 0.612 | neutral | None | None | None | None | N |
K/T | 0.4674 | ambiguous | 0.6139 | pathogenic | -0.534 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | N | 0.493559793 | None | None | N |
K/V | 0.433 | ambiguous | 0.5376 | ambiguous | 0.193 | Stabilizing | 0.996 | D | 0.64 | neutral | None | None | None | None | N |
K/W | 0.8852 | likely_pathogenic | 0.9365 | pathogenic | -0.114 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/Y | 0.8132 | likely_pathogenic | 0.8845 | pathogenic | 0.187 | Stabilizing | 0.997 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.