Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7368 | 22327;22328;22329 | chr2:178722797;178722796;178722795 | chr2:179587524;179587523;179587522 |
N2AB | 7051 | 21376;21377;21378 | chr2:178722797;178722796;178722795 | chr2:179587524;179587523;179587522 |
N2A | 6124 | 18595;18596;18597 | chr2:178722797;178722796;178722795 | chr2:179587524;179587523;179587522 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1420368632 | -0.715 | 0.454 | N | 0.292 | 0.078 | 0.18995819373 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/A | rs1420368632 | -0.715 | 0.454 | N | 0.292 | 0.078 | 0.18995819373 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/A | rs1420368632 | -0.715 | 0.454 | N | 0.292 | 0.078 | 0.18995819373 | gnomAD-4.0.0 | 8.6782E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.18687E-05 | 0 | 0 |
E/Q | None | None | 0.801 | N | 0.381 | 0.162 | 0.132336055621 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.089 | likely_benign | 0.1213 | benign | -0.828 | Destabilizing | 0.454 | N | 0.292 | neutral | N | 0.417439442 | None | None | N |
E/C | 0.7672 | likely_pathogenic | 0.901 | pathogenic | -0.391 | Destabilizing | 0.998 | D | 0.351 | neutral | None | None | None | None | N |
E/D | 0.0821 | likely_benign | 0.1165 | benign | -0.641 | Destabilizing | 0.454 | N | 0.302 | neutral | N | 0.372379156 | None | None | N |
E/F | 0.5832 | likely_pathogenic | 0.7768 | pathogenic | -0.386 | Destabilizing | 0.991 | D | 0.377 | neutral | None | None | None | None | N |
E/G | 0.1068 | likely_benign | 0.1619 | benign | -1.113 | Destabilizing | 0.005 | N | 0.199 | neutral | N | 0.412340266 | None | None | N |
E/H | 0.3203 | likely_benign | 0.5011 | ambiguous | -0.374 | Destabilizing | 0.974 | D | 0.327 | neutral | None | None | None | None | N |
E/I | 0.2638 | likely_benign | 0.4213 | ambiguous | -0.072 | Destabilizing | 0.949 | D | 0.414 | neutral | None | None | None | None | N |
E/K | 0.1285 | likely_benign | 0.2085 | benign | -0.343 | Destabilizing | 0.051 | N | 0.115 | neutral | N | 0.347672712 | None | None | N |
E/L | 0.28 | likely_benign | 0.4386 | ambiguous | -0.072 | Destabilizing | 0.842 | D | 0.399 | neutral | None | None | None | None | N |
E/M | 0.366 | ambiguous | 0.5145 | ambiguous | 0.216 | Stabilizing | 0.998 | D | 0.323 | neutral | None | None | None | None | N |
E/N | 0.1425 | likely_benign | 0.2434 | benign | -0.759 | Destabilizing | 0.067 | N | 0.103 | neutral | None | None | None | None | N |
E/P | 0.455 | ambiguous | 0.72 | pathogenic | -0.303 | Destabilizing | 0.991 | D | 0.409 | neutral | None | None | None | None | N |
E/Q | 0.1129 | likely_benign | 0.1557 | benign | -0.657 | Destabilizing | 0.801 | D | 0.381 | neutral | N | 0.427579078 | None | None | N |
E/R | 0.2043 | likely_benign | 0.3379 | benign | -0.01 | Destabilizing | 0.728 | D | 0.265 | neutral | None | None | None | None | N |
E/S | 0.1142 | likely_benign | 0.1764 | benign | -0.985 | Destabilizing | 0.525 | D | 0.281 | neutral | None | None | None | None | N |
E/T | 0.1391 | likely_benign | 0.215 | benign | -0.751 | Destabilizing | 0.029 | N | 0.137 | neutral | None | None | None | None | N |
E/V | 0.1712 | likely_benign | 0.267 | benign | -0.303 | Destabilizing | 0.801 | D | 0.349 | neutral | N | 0.432966255 | None | None | N |
E/W | 0.8009 | likely_pathogenic | 0.922 | pathogenic | -0.122 | Destabilizing | 0.998 | D | 0.412 | neutral | None | None | None | None | N |
E/Y | 0.4496 | ambiguous | 0.656 | pathogenic | -0.148 | Destabilizing | 0.991 | D | 0.347 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.