Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7373 | 22342;22343;22344 | chr2:178722782;178722781;178722780 | chr2:179587509;179587508;179587507 |
N2AB | 7056 | 21391;21392;21393 | chr2:178722782;178722781;178722780 | chr2:179587509;179587508;179587507 |
N2A | 6129 | 18610;18611;18612 | chr2:178722782;178722781;178722780 | chr2:179587509;179587508;179587507 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.015 | N | 0.256 | 0.191 | 0.32471235697 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9193 | likely_pathogenic | 0.9515 | pathogenic | -1.915 | Destabilizing | 0.884 | D | 0.559 | neutral | None | None | None | None | N |
F/C | 0.7783 | likely_pathogenic | 0.8531 | pathogenic | -0.847 | Destabilizing | 1.0 | D | 0.627 | neutral | N | 0.496657468 | None | None | N |
F/D | 0.9707 | likely_pathogenic | 0.9845 | pathogenic | -0.303 | Destabilizing | 0.949 | D | 0.615 | neutral | None | None | None | None | N |
F/E | 0.9725 | likely_pathogenic | 0.9834 | pathogenic | -0.266 | Destabilizing | 0.918 | D | 0.615 | neutral | None | None | None | None | N |
F/G | 0.9639 | likely_pathogenic | 0.9832 | pathogenic | -2.209 | Highly Destabilizing | 0.939 | D | 0.59 | neutral | None | None | None | None | N |
F/H | 0.8337 | likely_pathogenic | 0.8831 | pathogenic | -0.638 | Destabilizing | 0.975 | D | 0.594 | neutral | None | None | None | None | N |
F/I | 0.4968 | ambiguous | 0.5777 | pathogenic | -1.067 | Destabilizing | 0.853 | D | 0.435 | neutral | N | 0.498541539 | None | None | N |
F/K | 0.9568 | likely_pathogenic | 0.9771 | pathogenic | -0.822 | Destabilizing | 0.939 | D | 0.617 | neutral | None | None | None | None | N |
F/L | 0.9113 | likely_pathogenic | 0.9496 | pathogenic | -1.067 | Destabilizing | 0.015 | N | 0.256 | neutral | N | 0.495674592 | None | None | N |
F/M | 0.7688 | likely_pathogenic | 0.8364 | pathogenic | -0.746 | Destabilizing | 0.834 | D | 0.561 | neutral | None | None | None | None | N |
F/N | 0.9108 | likely_pathogenic | 0.9418 | pathogenic | -0.72 | Destabilizing | 0.332 | N | 0.47 | neutral | None | None | None | None | N |
F/P | 0.9973 | likely_pathogenic | 0.9989 | pathogenic | -1.337 | Destabilizing | 0.996 | D | 0.643 | neutral | None | None | None | None | N |
F/Q | 0.9324 | likely_pathogenic | 0.9582 | pathogenic | -0.846 | Destabilizing | 0.988 | D | 0.647 | neutral | None | None | None | None | N |
F/R | 0.9035 | likely_pathogenic | 0.945 | pathogenic | -0.178 | Destabilizing | 0.991 | D | 0.643 | neutral | None | None | None | None | N |
F/S | 0.8392 | likely_pathogenic | 0.8956 | pathogenic | -1.533 | Destabilizing | 0.521 | D | 0.449 | neutral | N | 0.513470919 | None | None | N |
F/T | 0.8764 | likely_pathogenic | 0.9112 | pathogenic | -1.403 | Destabilizing | 0.332 | N | 0.453 | neutral | None | None | None | None | N |
F/V | 0.5229 | ambiguous | 0.6079 | pathogenic | -1.337 | Destabilizing | 0.634 | D | 0.53 | neutral | N | 0.497346673 | None | None | N |
F/W | 0.784 | likely_pathogenic | 0.8395 | pathogenic | -0.505 | Destabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
F/Y | 0.314 | likely_benign | 0.3606 | ambiguous | -0.598 | Destabilizing | 0.065 | N | 0.258 | neutral | N | 0.476299397 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.