Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7375 | 22348;22349;22350 | chr2:178722776;178722775;178722774 | chr2:179587503;179587502;179587501 |
N2AB | 7058 | 21397;21398;21399 | chr2:178722776;178722775;178722774 | chr2:179587503;179587502;179587501 |
N2A | 6131 | 18616;18617;18618 | chr2:178722776;178722775;178722774 | chr2:179587503;179587502;179587501 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs750961839 | 0.532 | 0.028 | N | 0.12 | 0.123 | 0.0716867268079 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/K | rs750961839 | 0.532 | 0.028 | N | 0.12 | 0.123 | 0.0716867268079 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/K | rs750961839 | 0.532 | 0.028 | N | 0.12 | 0.123 | 0.0716867268079 | gnomAD-4.0.0 | 6.57774E-06 | None | None | None | None | I | None | 2.41488E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3249 | likely_benign | 0.5379 | ambiguous | -0.117 | Destabilizing | 0.068 | N | 0.274 | neutral | None | None | None | None | I |
N/C | 0.559 | ambiguous | 0.7377 | pathogenic | 0.17 | Stabilizing | 0.994 | D | 0.219 | neutral | None | None | None | None | I |
N/D | 0.0944 | likely_benign | 0.1695 | benign | 0.183 | Stabilizing | 0.001 | N | 0.105 | neutral | N | 0.420631676 | None | None | I |
N/E | 0.3727 | ambiguous | 0.6175 | pathogenic | 0.123 | Stabilizing | 0.272 | N | 0.263 | neutral | None | None | None | None | I |
N/F | 0.8182 | likely_pathogenic | 0.9313 | pathogenic | -0.712 | Destabilizing | 0.993 | D | 0.213 | neutral | None | None | None | None | I |
N/G | 0.2314 | likely_benign | 0.3653 | ambiguous | -0.214 | Destabilizing | 0.006 | N | 0.109 | neutral | None | None | None | None | I |
N/H | 0.1387 | likely_benign | 0.2177 | benign | -0.228 | Destabilizing | 0.976 | D | 0.227 | neutral | N | 0.501884835 | None | None | I |
N/I | 0.6881 | likely_pathogenic | 0.8933 | pathogenic | 0.04 | Stabilizing | 0.931 | D | 0.241 | neutral | N | 0.459744265 | None | None | I |
N/K | 0.2858 | likely_benign | 0.5376 | ambiguous | 0.161 | Stabilizing | 0.028 | N | 0.12 | neutral | N | 0.472831365 | None | None | I |
N/L | 0.5407 | ambiguous | 0.7452 | pathogenic | 0.04 | Stabilizing | 0.837 | D | 0.312 | neutral | None | None | None | None | I |
N/M | 0.6223 | likely_pathogenic | 0.8176 | pathogenic | 0.13 | Stabilizing | 0.995 | D | 0.197 | neutral | None | None | None | None | I |
N/P | 0.8542 | likely_pathogenic | 0.9271 | pathogenic | 0.011 | Stabilizing | 0.794 | D | 0.272 | neutral | None | None | None | None | I |
N/Q | 0.3508 | ambiguous | 0.553 | ambiguous | -0.271 | Destabilizing | 0.717 | D | 0.25 | neutral | None | None | None | None | I |
N/R | 0.3203 | likely_benign | 0.5415 | ambiguous | 0.216 | Stabilizing | 0.772 | D | 0.216 | neutral | None | None | None | None | I |
N/S | 0.0976 | likely_benign | 0.1315 | benign | -0.05 | Destabilizing | 0.146 | N | 0.285 | neutral | N | 0.477890468 | None | None | I |
N/T | 0.314 | likely_benign | 0.5085 | ambiguous | 0.01 | Stabilizing | 0.388 | N | 0.199 | neutral | N | 0.493726712 | None | None | I |
N/V | 0.6127 | likely_pathogenic | 0.8355 | pathogenic | 0.011 | Stabilizing | 0.601 | D | 0.301 | neutral | None | None | None | None | I |
N/W | 0.8674 | likely_pathogenic | 0.955 | pathogenic | -0.833 | Destabilizing | 0.998 | D | 0.342 | neutral | None | None | None | None | I |
N/Y | 0.3116 | likely_benign | 0.5032 | ambiguous | -0.506 | Destabilizing | 0.991 | D | 0.211 | neutral | N | 0.453819236 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.