Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7376 | 22351;22352;22353 | chr2:178722773;178722772;178722771 | chr2:179587500;179587499;179587498 |
N2AB | 7059 | 21400;21401;21402 | chr2:178722773;178722772;178722771 | chr2:179587500;179587499;179587498 |
N2A | 6132 | 18619;18620;18621 | chr2:178722773;178722772;178722771 | chr2:179587500;179587499;179587498 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs765538868 | -0.588 | 0.96 | N | 0.489 | 0.211 | 0.206339911435 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
N/S | rs765538868 | -0.588 | 0.96 | N | 0.489 | 0.211 | 0.206339911435 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs765538868 | -0.588 | 0.96 | N | 0.489 | 0.211 | 0.206339911435 | gnomAD-4.0.0 | 2.56393E-06 | None | None | None | None | N | None | 1.69182E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39451E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4809 | ambiguous | 0.6246 | pathogenic | -0.831 | Destabilizing | 0.836 | D | 0.624 | neutral | None | None | None | None | N |
N/C | 0.5657 | likely_pathogenic | 0.6475 | pathogenic | 0.036 | Stabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
N/D | 0.2044 | likely_benign | 0.2739 | benign | -0.188 | Destabilizing | 0.98 | D | 0.526 | neutral | N | 0.471797655 | None | None | N |
N/E | 0.637 | likely_pathogenic | 0.7702 | pathogenic | -0.092 | Destabilizing | 0.998 | D | 0.519 | neutral | None | None | None | None | N |
N/F | 0.8055 | likely_pathogenic | 0.8739 | pathogenic | -0.689 | Destabilizing | 0.739 | D | 0.523 | neutral | None | None | None | None | N |
N/G | 0.3418 | ambiguous | 0.4603 | ambiguous | -1.161 | Destabilizing | 0.257 | N | 0.242 | neutral | None | None | None | None | N |
N/H | 0.1637 | likely_benign | 0.2003 | benign | -0.866 | Destabilizing | 1.0 | D | 0.587 | neutral | D | 0.53629185 | None | None | N |
N/I | 0.6969 | likely_pathogenic | 0.8036 | pathogenic | 0.004 | Stabilizing | 0.997 | D | 0.721 | prob.delet. | D | 0.536465209 | None | None | N |
N/K | 0.4967 | ambiguous | 0.6347 | pathogenic | -0.058 | Destabilizing | 0.998 | D | 0.517 | neutral | N | 0.472605731 | None | None | N |
N/L | 0.5343 | ambiguous | 0.6428 | pathogenic | 0.004 | Stabilizing | 0.986 | D | 0.666 | neutral | None | None | None | None | N |
N/M | 0.6187 | likely_pathogenic | 0.7294 | pathogenic | 0.346 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
N/P | 0.9266 | likely_pathogenic | 0.9622 | pathogenic | -0.244 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
N/Q | 0.4998 | ambiguous | 0.6067 | pathogenic | -0.648 | Destabilizing | 1.0 | D | 0.571 | neutral | None | None | None | None | N |
N/R | 0.4988 | ambiguous | 0.612 | pathogenic | -0.113 | Destabilizing | 1.0 | D | 0.576 | neutral | None | None | None | None | N |
N/S | 0.1093 | likely_benign | 0.1479 | benign | -0.747 | Destabilizing | 0.96 | D | 0.489 | neutral | N | 0.456078841 | None | None | N |
N/T | 0.3092 | likely_benign | 0.4389 | ambiguous | -0.448 | Destabilizing | 0.987 | D | 0.521 | neutral | N | 0.478937058 | None | None | N |
N/V | 0.6848 | likely_pathogenic | 0.7947 | pathogenic | -0.244 | Destabilizing | 0.977 | D | 0.685 | prob.neutral | None | None | None | None | N |
N/W | 0.9133 | likely_pathogenic | 0.9468 | pathogenic | -0.461 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
N/Y | 0.3323 | likely_benign | 0.404 | ambiguous | -0.233 | Destabilizing | 0.998 | D | 0.716 | prob.delet. | N | 0.515551219 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.