Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7388 | 22387;22388;22389 | chr2:178722737;178722736;178722735 | chr2:179587464;179587463;179587462 |
N2AB | 7071 | 21436;21437;21438 | chr2:178722737;178722736;178722735 | chr2:179587464;179587463;179587462 |
N2A | 6144 | 18655;18656;18657 | chr2:178722737;178722736;178722735 | chr2:179587464;179587463;179587462 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.096 | N | 0.122 | 0.081 | 0.0482279557977 | gnomAD-4.0.0 | 6.8448E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99675E-07 | 0 | 0 |
N/S | rs1350328102 | 0.488 | None | N | 0.097 | 0.066 | 0.0297737177859 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
N/S | rs1350328102 | 0.488 | None | N | 0.097 | 0.066 | 0.0297737177859 | gnomAD-4.0.0 | 1.36894E-05 | None | None | None | None | I | None | 5.97943E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.52944E-05 | 0 | 1.65804E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.0978 | likely_benign | 0.1271 | benign | -0.211 | Destabilizing | 0.025 | N | 0.211 | neutral | None | None | None | None | I |
N/C | 0.1692 | likely_benign | 0.2618 | benign | 0.37 | Stabilizing | 0.883 | D | 0.195 | neutral | None | None | None | None | I |
N/D | 0.0884 | likely_benign | 0.1082 | benign | 0.16 | Stabilizing | 0.081 | N | 0.126 | neutral | N | 0.386500459 | None | None | I |
N/E | 0.2073 | likely_benign | 0.2691 | benign | 0.107 | Stabilizing | 0.124 | N | 0.119 | neutral | None | None | None | None | I |
N/F | 0.2505 | likely_benign | 0.3233 | benign | -0.711 | Destabilizing | 0.001 | N | 0.176 | neutral | None | None | None | None | I |
N/G | 0.1065 | likely_benign | 0.1478 | benign | -0.343 | Destabilizing | None | N | 0.097 | neutral | None | None | None | None | I |
N/H | 0.0716 | likely_benign | 0.086 | benign | -0.381 | Destabilizing | 0.602 | D | 0.232 | neutral | N | 0.452688166 | None | None | I |
N/I | 0.1251 | likely_benign | 0.1588 | benign | 0.042 | Stabilizing | 0.096 | N | 0.286 | neutral | N | 0.490475763 | None | None | I |
N/K | 0.1557 | likely_benign | 0.2111 | benign | 0.182 | Stabilizing | 0.096 | N | 0.122 | neutral | N | 0.399392399 | None | None | I |
N/L | 0.1191 | likely_benign | 0.1478 | benign | 0.042 | Stabilizing | 0.055 | N | 0.231 | neutral | None | None | None | None | I |
N/M | 0.1797 | likely_benign | 0.2254 | benign | 0.317 | Stabilizing | 0.667 | D | 0.205 | neutral | None | None | None | None | I |
N/P | 0.264 | likely_benign | 0.3964 | ambiguous | -0.018 | Destabilizing | 0.22 | N | 0.291 | neutral | None | None | None | None | I |
N/Q | 0.1672 | likely_benign | 0.2198 | benign | -0.207 | Destabilizing | 0.497 | N | 0.204 | neutral | None | None | None | None | I |
N/R | 0.1512 | likely_benign | 0.2192 | benign | 0.254 | Stabilizing | 0.22 | N | 0.189 | neutral | None | None | None | None | I |
N/S | 0.0517 | likely_benign | 0.0584 | benign | 0.016 | Stabilizing | None | N | 0.097 | neutral | N | 0.346056559 | None | None | I |
N/T | 0.0707 | likely_benign | 0.0862 | benign | 0.092 | Stabilizing | 0.003 | N | 0.144 | neutral | N | 0.422191901 | None | None | I |
N/V | 0.1357 | likely_benign | 0.1778 | benign | -0.018 | Destabilizing | 0.004 | N | 0.195 | neutral | None | None | None | None | I |
N/W | 0.4053 | ambiguous | 0.5592 | ambiguous | -0.77 | Destabilizing | 0.958 | D | 0.203 | neutral | None | None | None | None | I |
N/Y | 0.099 | likely_benign | 0.1269 | benign | -0.473 | Destabilizing | 0.272 | N | 0.267 | neutral | N | 0.464078596 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.