Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7391 | 22396;22397;22398 | chr2:178722728;178722727;178722726 | chr2:179587455;179587454;179587453 |
N2AB | 7074 | 21445;21446;21447 | chr2:178722728;178722727;178722726 | chr2:179587455;179587454;179587453 |
N2A | 6147 | 18664;18665;18666 | chr2:178722728;178722727;178722726 | chr2:179587455;179587454;179587453 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.999 | D | 0.799 | 0.618 | 0.611664894473 | gnomAD-4.0.0 | 3.42254E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.64069E-05 | 1.65821E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2081 | likely_benign | 0.3293 | benign | -0.389 | Destabilizing | 0.091 | N | 0.522 | neutral | D | 0.542895174 | None | None | I |
G/C | 0.5574 | ambiguous | 0.805 | pathogenic | -0.644 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
G/D | 0.5483 | ambiguous | 0.7745 | pathogenic | -0.558 | Destabilizing | 0.997 | D | 0.787 | deleterious | None | None | None | None | I |
G/E | 0.6562 | likely_pathogenic | 0.8609 | pathogenic | -0.541 | Destabilizing | 0.998 | D | 0.787 | deleterious | D | 0.647408552 | None | None | I |
G/F | 0.911 | likely_pathogenic | 0.9722 | pathogenic | -0.605 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | I |
G/H | 0.8468 | likely_pathogenic | 0.9526 | pathogenic | -1.157 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
G/I | 0.8338 | likely_pathogenic | 0.9536 | pathogenic | 0.221 | Stabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | I |
G/K | 0.8375 | likely_pathogenic | 0.9519 | pathogenic | -0.804 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | I |
G/L | 0.7937 | likely_pathogenic | 0.932 | pathogenic | 0.221 | Stabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | I |
G/M | 0.832 | likely_pathogenic | 0.9456 | pathogenic | 0.064 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/N | 0.6813 | likely_pathogenic | 0.8723 | pathogenic | -0.652 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | I |
G/P | 0.9884 | likely_pathogenic | 0.9965 | pathogenic | 0.063 | Stabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | I |
G/Q | 0.6988 | likely_pathogenic | 0.8763 | pathogenic | -0.663 | Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | I |
G/R | 0.6674 | likely_pathogenic | 0.8662 | pathogenic | -0.751 | Destabilizing | 0.999 | D | 0.799 | deleterious | D | 0.647206747 | None | None | I |
G/S | 0.1695 | likely_benign | 0.2888 | benign | -1.022 | Destabilizing | 0.793 | D | 0.553 | neutral | None | None | None | None | I |
G/T | 0.4961 | ambiguous | 0.7435 | pathogenic | -0.891 | Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | I |
G/V | 0.6775 | likely_pathogenic | 0.8818 | pathogenic | 0.063 | Stabilizing | 0.997 | D | 0.801 | deleterious | D | 0.647408552 | None | None | I |
G/W | 0.859 | likely_pathogenic | 0.9533 | pathogenic | -1.122 | Destabilizing | 0.802 | D | 0.705 | prob.neutral | None | None | None | None | I |
G/Y | 0.8824 | likely_pathogenic | 0.9679 | pathogenic | -0.57 | Destabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.