Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7392 | 22399;22400;22401 | chr2:178722725;178722724;178722723 | chr2:179587452;179587451;179587450 |
N2AB | 7075 | 21448;21449;21450 | chr2:178722725;178722724;178722723 | chr2:179587452;179587451;179587450 |
N2A | 6148 | 18667;18668;18669 | chr2:178722725;178722724;178722723 | chr2:179587452;179587451;179587450 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs2078620935 | None | 0.988 | N | 0.488 | 0.265 | 0.231873229951 | gnomAD-4.0.0 | 2.05348E-06 | None | None | None | None | N | None | 8.97076E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1194 | likely_benign | 0.1466 | benign | -1.081 | Destabilizing | 0.811 | D | 0.387 | neutral | D | 0.523746628 | None | None | N |
E/C | 0.7653 | likely_pathogenic | 0.8372 | pathogenic | -0.469 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/D | 0.1192 | likely_benign | 0.1331 | benign | -1.011 | Destabilizing | 0.988 | D | 0.488 | neutral | N | 0.482073363 | None | None | N |
E/F | 0.522 | ambiguous | 0.6159 | pathogenic | -0.538 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
E/G | 0.1747 | likely_benign | 0.2304 | benign | -1.43 | Destabilizing | 0.999 | D | 0.651 | neutral | N | 0.503787493 | None | None | N |
E/H | 0.344 | ambiguous | 0.4285 | ambiguous | -0.725 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/I | 0.174 | likely_benign | 0.2072 | benign | -0.13 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
E/K | 0.1239 | likely_benign | 0.1578 | benign | -0.473 | Destabilizing | 0.999 | D | 0.523 | neutral | N | 0.482686652 | None | None | N |
E/L | 0.2307 | likely_benign | 0.2933 | benign | -0.13 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
E/M | 0.2792 | likely_benign | 0.3453 | ambiguous | 0.381 | Stabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
E/N | 0.1854 | likely_benign | 0.2259 | benign | -1.002 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
E/P | 0.4656 | ambiguous | 0.5689 | pathogenic | -0.427 | Destabilizing | 0.997 | D | 0.769 | deleterious | None | None | None | None | N |
E/Q | 0.1164 | likely_benign | 0.1376 | benign | -0.893 | Destabilizing | 1.0 | D | 0.625 | neutral | N | 0.50687302 | None | None | N |
E/R | 0.2104 | likely_benign | 0.2729 | benign | -0.208 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
E/S | 0.1551 | likely_benign | 0.1903 | benign | -1.308 | Destabilizing | 0.995 | D | 0.522 | neutral | None | None | None | None | N |
E/T | 0.1447 | likely_benign | 0.174 | benign | -1.008 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/V | 0.1189 | likely_benign | 0.1386 | benign | -0.427 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.45944722 | None | None | N |
E/W | 0.7646 | likely_pathogenic | 0.8402 | pathogenic | -0.209 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/Y | 0.4259 | ambiguous | 0.5244 | ambiguous | -0.253 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.