Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7393 | 22402;22403;22404 | chr2:178722722;178722721;178722720 | chr2:179587449;179587448;179587447 |
N2AB | 7076 | 21451;21452;21453 | chr2:178722722;178722721;178722720 | chr2:179587449;179587448;179587447 |
N2A | 6149 | 18670;18671;18672 | chr2:178722722;178722721;178722720 | chr2:179587449;179587448;179587447 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | rs1185905654 | None | 1.0 | D | 0.881 | 0.857 | 0.893575084684 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/D | rs1185905654 | None | 1.0 | D | 0.881 | 0.857 | 0.893575084684 | gnomAD-4.0.0 | 6.57748E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47106E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.991 | likely_pathogenic | 0.9975 | pathogenic | -2.116 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
Y/C | 0.935 | likely_pathogenic | 0.9831 | pathogenic | -1.624 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.653423396 | None | None | N |
Y/D | 0.9957 | likely_pathogenic | 0.9987 | pathogenic | -2.68 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.653423396 | None | None | N |
Y/E | 0.9976 | likely_pathogenic | 0.9992 | pathogenic | -2.428 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
Y/F | 0.2083 | likely_benign | 0.3459 | ambiguous | -0.756 | Destabilizing | 1.0 | D | 0.668 | neutral | D | 0.569945921 | None | None | N |
Y/G | 0.9865 | likely_pathogenic | 0.995 | pathogenic | -2.569 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
Y/H | 0.9737 | likely_pathogenic | 0.9924 | pathogenic | -2.074 | Highly Destabilizing | 1.0 | D | 0.705 | prob.neutral | D | 0.653221591 | None | None | N |
Y/I | 0.7621 | likely_pathogenic | 0.878 | pathogenic | -0.618 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
Y/K | 0.9979 | likely_pathogenic | 0.9992 | pathogenic | -1.73 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
Y/L | 0.7857 | likely_pathogenic | 0.8756 | pathogenic | -0.618 | Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
Y/M | 0.9268 | likely_pathogenic | 0.9731 | pathogenic | -0.814 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
Y/N | 0.9721 | likely_pathogenic | 0.9896 | pathogenic | -2.623 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | D | 0.653423396 | None | None | N |
Y/P | 0.9983 | likely_pathogenic | 0.9994 | pathogenic | -1.133 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
Y/Q | 0.9975 | likely_pathogenic | 0.9994 | pathogenic | -2.15 | Highly Destabilizing | 0.978 | D | 0.647 | neutral | None | None | None | None | N |
Y/R | 0.9943 | likely_pathogenic | 0.9979 | pathogenic | -2.077 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
Y/S | 0.988 | likely_pathogenic | 0.9964 | pathogenic | -2.954 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.653423396 | None | None | N |
Y/T | 0.9912 | likely_pathogenic | 0.9975 | pathogenic | -2.551 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Y/V | 0.7446 | likely_pathogenic | 0.8697 | pathogenic | -1.133 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Y/W | 0.87 | likely_pathogenic | 0.9342 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.