Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7404 | 22435;22436;22437 | chr2:178722689;178722688;178722687 | chr2:179587416;179587415;179587414 |
N2AB | 7087 | 21484;21485;21486 | chr2:178722689;178722688;178722687 | chr2:179587416;179587415;179587414 |
N2A | 6160 | 18703;18704;18705 | chr2:178722689;178722688;178722687 | chr2:179587416;179587415;179587414 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.136 | N | 0.335 | 0.189 | 0.238705975628 | gnomAD-4.0.0 | 6.84774E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52423E-05 | None | 0 | 0 | 0 | 0 | 0 |
A/T | None | None | 0.669 | N | 0.42 | 0.249 | 0.337135696972 | gnomAD-4.0.0 | 6.84774E-07 | None | None | None | None | I | None | 0 | 2.24004E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6218 | likely_pathogenic | 0.6373 | pathogenic | -0.814 | Destabilizing | 0.998 | D | 0.484 | neutral | None | None | None | None | I |
A/D | 0.3259 | likely_benign | 0.5123 | ambiguous | -0.443 | Destabilizing | 0.028 | N | 0.417 | neutral | N | 0.507662454 | None | None | I |
A/E | 0.3647 | ambiguous | 0.4595 | ambiguous | -0.488 | Destabilizing | 0.728 | D | 0.48 | neutral | None | None | None | None | I |
A/F | 0.4131 | ambiguous | 0.4771 | ambiguous | -0.824 | Destabilizing | 0.949 | D | 0.573 | neutral | None | None | None | None | I |
A/G | 0.2301 | likely_benign | 0.2853 | benign | -0.939 | Destabilizing | 0.801 | D | 0.401 | neutral | N | 0.486950685 | None | None | I |
A/H | 0.6099 | likely_pathogenic | 0.676 | pathogenic | -0.951 | Destabilizing | 0.998 | D | 0.523 | neutral | None | None | None | None | I |
A/I | 0.2453 | likely_benign | 0.2914 | benign | -0.24 | Destabilizing | 0.904 | D | 0.5 | neutral | None | None | None | None | I |
A/K | 0.547 | ambiguous | 0.6385 | pathogenic | -0.866 | Destabilizing | 0.842 | D | 0.483 | neutral | None | None | None | None | I |
A/L | 0.2946 | likely_benign | 0.337 | benign | -0.24 | Destabilizing | 0.728 | D | 0.463 | neutral | None | None | None | None | I |
A/M | 0.3151 | likely_benign | 0.3533 | ambiguous | -0.301 | Destabilizing | 0.993 | D | 0.486 | neutral | None | None | None | None | I |
A/N | 0.3644 | ambiguous | 0.4716 | ambiguous | -0.594 | Destabilizing | 0.904 | D | 0.549 | neutral | None | None | None | None | I |
A/P | 0.9349 | likely_pathogenic | 0.9662 | pathogenic | -0.354 | Destabilizing | 0.028 | N | 0.321 | neutral | N | 0.496256302 | None | None | I |
A/Q | 0.4773 | ambiguous | 0.5288 | ambiguous | -0.741 | Destabilizing | 0.974 | D | 0.537 | neutral | None | None | None | None | I |
A/R | 0.4766 | ambiguous | 0.543 | ambiguous | -0.556 | Destabilizing | 0.974 | D | 0.533 | neutral | None | None | None | None | I |
A/S | 0.1065 | likely_benign | 0.1164 | benign | -1.017 | Destabilizing | 0.136 | N | 0.335 | neutral | N | 0.480534568 | None | None | I |
A/T | 0.0878 | likely_benign | 0.0972 | benign | -0.957 | Destabilizing | 0.669 | D | 0.42 | neutral | N | 0.48392159 | None | None | I |
A/V | 0.1119 | likely_benign | 0.1287 | benign | -0.354 | Destabilizing | 0.111 | N | 0.295 | neutral | N | 0.4698935 | None | None | I |
A/W | 0.8777 | likely_pathogenic | 0.9131 | pathogenic | -1.098 | Destabilizing | 0.081 | N | 0.573 | neutral | None | None | None | None | I |
A/Y | 0.5859 | likely_pathogenic | 0.6677 | pathogenic | -0.689 | Destabilizing | 0.949 | D | 0.567 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.