Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7405 | 22438;22439;22440 | chr2:178722686;178722685;178722684 | chr2:179587413;179587412;179587411 |
N2AB | 7088 | 21487;21488;21489 | chr2:178722686;178722685;178722684 | chr2:179587413;179587412;179587411 |
N2A | 6161 | 18706;18707;18708 | chr2:178722686;178722685;178722684 | chr2:179587413;179587412;179587411 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs794729627 | None | None | N | 0.397 | 0.145 | 0.479818277033 | gnomAD-4.0.0 | 2.05445E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73732E-04 | 1.79998E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0681 | likely_benign | 0.0692 | benign | -0.632 | Destabilizing | None | N | 0.163 | neutral | D | 0.525613497 | None | None | N |
S/C | 0.1087 | likely_benign | 0.1091 | benign | -0.37 | Destabilizing | 0.295 | N | 0.522 | neutral | N | 0.520107775 | None | None | N |
S/D | 0.2952 | likely_benign | 0.3739 | ambiguous | 0.376 | Stabilizing | 0.072 | N | 0.411 | neutral | None | None | None | None | N |
S/E | 0.3397 | likely_benign | 0.3949 | ambiguous | 0.314 | Stabilizing | 0.072 | N | 0.417 | neutral | None | None | None | None | N |
S/F | 0.0828 | likely_benign | 0.1001 | benign | -1.007 | Destabilizing | None | N | 0.397 | neutral | N | 0.48832981 | None | None | N |
S/G | 0.1342 | likely_benign | 0.1432 | benign | -0.8 | Destabilizing | 0.016 | N | 0.355 | neutral | None | None | None | None | N |
S/H | 0.2406 | likely_benign | 0.2626 | benign | -1.207 | Destabilizing | 0.001 | N | 0.32 | neutral | None | None | None | None | N |
S/I | 0.0925 | likely_benign | 0.0984 | benign | -0.306 | Destabilizing | 0.013 | N | 0.517 | neutral | None | None | None | None | N |
S/K | 0.4965 | ambiguous | 0.5663 | pathogenic | -0.499 | Destabilizing | 0.072 | N | 0.409 | neutral | None | None | None | None | N |
S/L | 0.0812 | likely_benign | 0.0811 | benign | -0.306 | Destabilizing | 0.016 | N | 0.439 | neutral | None | None | None | None | N |
S/M | 0.1522 | likely_benign | 0.1539 | benign | -0.06 | Destabilizing | 0.214 | N | 0.531 | neutral | None | None | None | None | N |
S/N | 0.1337 | likely_benign | 0.1381 | benign | -0.251 | Destabilizing | 0.072 | N | 0.405 | neutral | None | None | None | None | N |
S/P | 0.5449 | ambiguous | 0.6561 | pathogenic | -0.384 | Destabilizing | None | N | 0.279 | neutral | N | 0.519600796 | None | None | N |
S/Q | 0.3687 | ambiguous | 0.4051 | ambiguous | -0.473 | Destabilizing | 0.356 | N | 0.497 | neutral | None | None | None | None | N |
S/R | 0.4029 | ambiguous | 0.4733 | ambiguous | -0.317 | Destabilizing | 0.072 | N | 0.567 | neutral | None | None | None | None | N |
S/T | 0.0686 | likely_benign | 0.0668 | benign | -0.41 | Destabilizing | None | N | 0.207 | neutral | N | 0.492324856 | None | None | N |
S/V | 0.0937 | likely_benign | 0.099 | benign | -0.384 | Destabilizing | None | N | 0.387 | neutral | None | None | None | None | N |
S/W | 0.2063 | likely_benign | 0.262 | benign | -0.939 | Destabilizing | 0.864 | D | 0.571 | neutral | None | None | None | None | N |
S/Y | 0.0979 | likely_benign | 0.1136 | benign | -0.694 | Destabilizing | 0.029 | N | 0.618 | neutral | N | 0.489570805 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.