Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7407 | 22444;22445;22446 | chr2:178722680;178722679;178722678 | chr2:179587407;179587406;179587405 |
N2AB | 7090 | 21493;21494;21495 | chr2:178722680;178722679;178722678 | chr2:179587407;179587406;179587405 |
N2A | 6163 | 18712;18713;18714 | chr2:178722680;178722679;178722678 | chr2:179587407;179587406;179587405 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs548543520 | 0.213 | 0.001 | N | 0.231 | 0.098 | 0.115124310173 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.29E-05 | None | 0 | 0 | 0 |
K/N | rs548543520 | 0.213 | 0.001 | N | 0.231 | 0.098 | 0.115124310173 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06868E-04 | 0 |
K/N | rs548543520 | 0.213 | 0.001 | N | 0.231 | 0.098 | 0.115124310173 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
K/N | rs548543520 | 0.213 | 0.001 | N | 0.231 | 0.098 | 0.115124310173 | gnomAD-4.0.0 | 4.05938E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.87882E-04 | 0 |
K/R | None | None | 0.096 | N | 0.481 | 0.101 | 0.181679512989 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.176 | likely_benign | 0.217 | benign | -0.264 | Destabilizing | 0.055 | N | 0.407 | neutral | None | None | None | None | N |
K/C | 0.5126 | ambiguous | 0.5899 | pathogenic | -0.312 | Destabilizing | 0.958 | D | 0.563 | neutral | None | None | None | None | N |
K/D | 0.2825 | likely_benign | 0.3836 | ambiguous | 0.064 | Stabilizing | 0.124 | N | 0.533 | neutral | None | None | None | None | N |
K/E | 0.096 | likely_benign | 0.1176 | benign | 0.077 | Stabilizing | 0.042 | N | 0.499 | neutral | N | 0.424891929 | None | None | N |
K/F | 0.5388 | ambiguous | 0.6435 | pathogenic | -0.461 | Destabilizing | 0.497 | N | 0.59 | neutral | None | None | None | None | N |
K/G | 0.2327 | likely_benign | 0.3013 | benign | -0.495 | Destabilizing | 0.055 | N | 0.511 | neutral | None | None | None | None | N |
K/H | 0.1875 | likely_benign | 0.2253 | benign | -0.878 | Destabilizing | 0.497 | N | 0.584 | neutral | None | None | None | None | N |
K/I | 0.2439 | likely_benign | 0.3075 | benign | 0.275 | Stabilizing | 0.124 | N | 0.581 | neutral | None | None | None | None | N |
K/L | 0.2255 | likely_benign | 0.2936 | benign | 0.275 | Stabilizing | 0.001 | N | 0.345 | neutral | None | None | None | None | N |
K/M | 0.1622 | likely_benign | 0.2022 | benign | 0.328 | Stabilizing | 0.427 | N | 0.575 | neutral | N | 0.502104706 | None | None | N |
K/N | 0.1576 | likely_benign | 0.2097 | benign | 0.122 | Stabilizing | 0.001 | N | 0.231 | neutral | N | 0.440997532 | None | None | N |
K/P | 0.5029 | ambiguous | 0.6367 | pathogenic | 0.124 | Stabilizing | 0.364 | N | 0.613 | neutral | None | None | None | None | N |
K/Q | 0.0908 | likely_benign | 0.1001 | benign | -0.155 | Destabilizing | 0.003 | N | 0.28 | neutral | N | 0.471261724 | None | None | N |
K/R | 0.0772 | likely_benign | 0.0797 | benign | -0.091 | Destabilizing | 0.096 | N | 0.481 | neutral | N | 0.449539657 | None | None | N |
K/S | 0.1506 | likely_benign | 0.1884 | benign | -0.499 | Destabilizing | 0.011 | N | 0.195 | neutral | None | None | None | None | N |
K/T | 0.0899 | likely_benign | 0.1018 | benign | -0.325 | Destabilizing | 0.001 | N | 0.255 | neutral | N | 0.435666283 | None | None | N |
K/V | 0.2079 | likely_benign | 0.2581 | benign | 0.124 | Stabilizing | 0.004 | N | 0.358 | neutral | None | None | None | None | N |
K/W | 0.5965 | likely_pathogenic | 0.693 | pathogenic | -0.355 | Destabilizing | 0.958 | D | 0.584 | neutral | None | None | None | None | N |
K/Y | 0.4056 | ambiguous | 0.513 | ambiguous | -0.006 | Destabilizing | 0.667 | D | 0.585 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.