Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7408 | 22447;22448;22449 | chr2:178722677;178722676;178722675 | chr2:179587404;179587403;179587402 |
N2AB | 7091 | 21496;21497;21498 | chr2:178722677;178722676;178722675 | chr2:179587404;179587403;179587402 |
N2A | 6164 | 18715;18716;18717 | chr2:178722677;178722676;178722675 | chr2:179587404;179587403;179587402 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.642 | N | 0.681 | 0.235 | 0.419713421852 | gnomAD-4.0.0 | 2.40066E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0618 | likely_benign | 0.0626 | benign | -1.193 | Destabilizing | 0.001 | N | 0.123 | neutral | N | 0.387464118 | None | None | N |
T/C | 0.3955 | ambiguous | 0.4201 | ambiguous | -0.828 | Destabilizing | 0.003 | N | 0.349 | neutral | None | None | None | None | N |
T/D | 0.6257 | likely_pathogenic | 0.7887 | pathogenic | -0.685 | Destabilizing | 0.704 | D | 0.684 | prob.neutral | None | None | None | None | N |
T/E | 0.5484 | ambiguous | 0.7383 | pathogenic | -0.566 | Destabilizing | 0.704 | D | 0.673 | neutral | None | None | None | None | N |
T/F | 0.4493 | ambiguous | 0.6674 | pathogenic | -0.976 | Destabilizing | 0.944 | D | 0.743 | deleterious | None | None | None | None | N |
T/G | 0.2244 | likely_benign | 0.2817 | benign | -1.551 | Destabilizing | 0.329 | N | 0.621 | neutral | None | None | None | None | N |
T/H | 0.4879 | ambiguous | 0.6786 | pathogenic | -1.674 | Destabilizing | 0.981 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/I | 0.2809 | likely_benign | 0.4638 | ambiguous | -0.284 | Destabilizing | 0.642 | D | 0.681 | prob.neutral | N | 0.488457831 | None | None | N |
T/K | 0.4586 | ambiguous | 0.6693 | pathogenic | -0.596 | Destabilizing | 0.704 | D | 0.667 | neutral | None | None | None | None | N |
T/L | 0.1855 | likely_benign | 0.2743 | benign | -0.284 | Destabilizing | 0.495 | N | 0.601 | neutral | None | None | None | None | N |
T/M | 0.1044 | likely_benign | 0.141 | benign | -0.175 | Destabilizing | 0.981 | D | 0.72 | prob.delet. | None | None | None | None | N |
T/N | 0.2288 | likely_benign | 0.3492 | ambiguous | -0.91 | Destabilizing | 0.642 | D | 0.611 | neutral | N | 0.489264409 | None | None | N |
T/P | 0.6072 | likely_pathogenic | 0.8123 | pathogenic | -0.555 | Destabilizing | 0.784 | D | 0.75 | deleterious | N | 0.507758455 | None | None | N |
T/Q | 0.4373 | ambiguous | 0.6131 | pathogenic | -0.892 | Destabilizing | 0.944 | D | 0.752 | deleterious | None | None | None | None | N |
T/R | 0.3735 | ambiguous | 0.5645 | pathogenic | -0.615 | Destabilizing | 0.704 | D | 0.754 | deleterious | None | None | None | None | N |
T/S | 0.1289 | likely_benign | 0.159 | benign | -1.261 | Destabilizing | 0.01 | N | 0.139 | neutral | N | 0.477262189 | None | None | N |
T/V | 0.1753 | likely_benign | 0.2382 | benign | -0.555 | Destabilizing | 0.329 | N | 0.505 | neutral | None | None | None | None | N |
T/W | 0.8173 | likely_pathogenic | 0.9255 | pathogenic | -0.929 | Destabilizing | 0.995 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/Y | 0.4823 | ambiguous | 0.6843 | pathogenic | -0.64 | Destabilizing | 0.981 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.