Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7410 | 22453;22454;22455 | chr2:178722671;178722670;178722669 | chr2:179587398;179587397;179587396 |
N2AB | 7093 | 21502;21503;21504 | chr2:178722671;178722670;178722669 | chr2:179587398;179587397;179587396 |
N2A | 6166 | 18721;18722;18723 | chr2:178722671;178722670;178722669 | chr2:179587398;179587397;179587396 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs747973968 | -0.601 | 0.002 | N | 0.239 | 0.122 | 0.0716867268079 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 0 | 2.94E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
F/L | rs747973968 | -0.601 | 0.002 | N | 0.239 | 0.122 | 0.0716867268079 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 1.88466E-04 | 0 | 0 | 0 | 0 |
F/L | rs747973968 | -0.601 | 0.002 | N | 0.239 | 0.122 | 0.0716867268079 | gnomAD-4.0.0 | 6.86648E-07 | None | None | None | None | N | None | 0 | 2.25744E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8111 | likely_pathogenic | 0.9021 | pathogenic | -1.821 | Destabilizing | 0.688 | D | 0.61 | neutral | None | None | None | None | N |
F/C | 0.3598 | ambiguous | 0.546 | ambiguous | -1.008 | Destabilizing | 0.997 | D | 0.623 | neutral | N | 0.490147689 | None | None | N |
F/D | 0.9893 | likely_pathogenic | 0.9951 | pathogenic | -2.796 | Highly Destabilizing | 0.991 | D | 0.665 | neutral | None | None | None | None | N |
F/E | 0.9842 | likely_pathogenic | 0.9924 | pathogenic | -2.533 | Highly Destabilizing | 0.991 | D | 0.665 | neutral | None | None | None | None | N |
F/G | 0.9387 | likely_pathogenic | 0.9702 | pathogenic | -2.3 | Highly Destabilizing | 0.971 | D | 0.65 | neutral | None | None | None | None | N |
F/H | 0.925 | likely_pathogenic | 0.9621 | pathogenic | -1.89 | Destabilizing | 0.998 | D | 0.608 | neutral | None | None | None | None | N |
F/I | 0.1416 | likely_benign | 0.21 | benign | -0.255 | Destabilizing | 0.454 | N | 0.503 | neutral | N | 0.386287029 | None | None | N |
F/K | 0.9829 | likely_pathogenic | 0.9912 | pathogenic | -1.583 | Destabilizing | 0.974 | D | 0.67 | neutral | None | None | None | None | N |
F/L | 0.4955 | ambiguous | 0.5895 | pathogenic | -0.255 | Destabilizing | 0.002 | N | 0.239 | neutral | N | 0.262613165 | None | None | N |
F/M | 0.4499 | ambiguous | 0.5417 | ambiguous | -0.199 | Destabilizing | 0.949 | D | 0.663 | neutral | None | None | None | None | N |
F/N | 0.9641 | likely_pathogenic | 0.9823 | pathogenic | -2.338 | Highly Destabilizing | 0.991 | D | 0.668 | neutral | None | None | None | None | N |
F/P | 0.9878 | likely_pathogenic | 0.9957 | pathogenic | -0.791 | Destabilizing | 0.991 | D | 0.669 | neutral | None | None | None | None | N |
F/Q | 0.9621 | likely_pathogenic | 0.9802 | pathogenic | -1.98 | Destabilizing | 0.991 | D | 0.677 | prob.neutral | None | None | None | None | N |
F/R | 0.9563 | likely_pathogenic | 0.9764 | pathogenic | -1.835 | Destabilizing | 0.974 | D | 0.673 | neutral | None | None | None | None | N |
F/S | 0.8744 | likely_pathogenic | 0.946 | pathogenic | -2.703 | Highly Destabilizing | 0.891 | D | 0.627 | neutral | N | 0.471465928 | None | None | N |
F/T | 0.8629 | likely_pathogenic | 0.9325 | pathogenic | -2.301 | Highly Destabilizing | 0.842 | D | 0.617 | neutral | None | None | None | None | N |
F/V | 0.1871 | likely_benign | 0.2699 | benign | -0.791 | Destabilizing | 0.022 | N | 0.365 | neutral | N | 0.330198886 | None | None | N |
F/W | 0.6677 | likely_pathogenic | 0.773 | pathogenic | -0.024 | Destabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | N |
F/Y | 0.3137 | likely_benign | 0.4167 | ambiguous | -0.353 | Destabilizing | 0.891 | D | 0.581 | neutral | N | 0.490147689 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.