Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7411 | 22456;22457;22458 | chr2:178722668;178722667;178722666 | chr2:179587395;179587394;179587393 |
N2AB | 7094 | 21505;21506;21507 | chr2:178722668;178722667;178722666 | chr2:179587395;179587394;179587393 |
N2A | 6167 | 18724;18725;18726 | chr2:178722668;178722667;178722666 | chr2:179587395;179587394;179587393 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs780911294 | -0.907 | 0.086 | N | 0.23 | 0.138 | 0.325533332567 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | N | None | 0 | 2.96E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/G | rs780911294 | -0.907 | 0.086 | N | 0.23 | 0.138 | 0.325533332567 | gnomAD-4.0.0 | 1.60747E-06 | None | None | None | None | N | None | 0 | 2.31911E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1436 | likely_benign | 0.2058 | benign | -0.386 | Destabilizing | 0.051 | N | 0.178 | neutral | None | None | None | None | N |
R/C | 0.1025 | likely_benign | 0.1348 | benign | -0.415 | Destabilizing | 0.968 | D | 0.265 | neutral | None | None | None | None | N |
R/D | 0.2723 | likely_benign | 0.3942 | ambiguous | 0.101 | Stabilizing | 0.223 | N | 0.231 | neutral | None | None | None | None | N |
R/E | 0.1614 | likely_benign | 0.22 | benign | 0.209 | Stabilizing | 0.365 | N | 0.163 | neutral | None | None | None | None | N |
R/F | 0.2244 | likely_benign | 0.3195 | benign | -0.311 | Destabilizing | 0.908 | D | 0.365 | neutral | None | None | None | None | N |
R/G | 0.1053 | likely_benign | 0.1603 | benign | -0.666 | Destabilizing | 0.086 | N | 0.23 | neutral | N | 0.491033124 | None | None | N |
R/H | 0.0621 | likely_benign | 0.0702 | benign | -1.005 | Destabilizing | 0.908 | D | 0.274 | neutral | None | None | None | None | N |
R/I | 0.0992 | likely_benign | 0.1222 | benign | 0.347 | Stabilizing | 0.178 | N | 0.274 | neutral | N | 0.418188803 | None | None | N |
R/K | 0.0753 | likely_benign | 0.0889 | benign | -0.387 | Destabilizing | 0.159 | N | 0.159 | neutral | N | 0.399429684 | None | None | N |
R/L | 0.1031 | likely_benign | 0.1308 | benign | 0.347 | Stabilizing | 0.111 | N | 0.232 | neutral | None | None | None | None | N |
R/M | 0.1235 | likely_benign | 0.1583 | benign | -0.088 | Destabilizing | 0.908 | D | 0.265 | neutral | None | None | None | None | N |
R/N | 0.1859 | likely_benign | 0.2666 | benign | 0.034 | Stabilizing | 0.008 | N | 0.131 | neutral | None | None | None | None | N |
R/P | 0.461 | ambiguous | 0.6622 | pathogenic | 0.124 | Stabilizing | 0.738 | D | 0.357 | neutral | None | None | None | None | N |
R/Q | 0.0708 | likely_benign | 0.0817 | benign | -0.103 | Destabilizing | 0.738 | D | 0.226 | neutral | None | None | None | None | N |
R/S | 0.1407 | likely_benign | 0.2022 | benign | -0.596 | Destabilizing | 0.002 | N | 0.132 | neutral | N | 0.421037108 | None | None | N |
R/T | 0.0759 | likely_benign | 0.0909 | benign | -0.317 | Destabilizing | 0.002 | N | 0.115 | neutral | N | 0.335108847 | None | None | N |
R/V | 0.1311 | likely_benign | 0.1656 | benign | 0.124 | Stabilizing | 0.008 | N | 0.197 | neutral | None | None | None | None | N |
R/W | 0.0997 | likely_benign | 0.1317 | benign | -0.102 | Destabilizing | 0.991 | D | 0.257 | neutral | None | None | None | None | N |
R/Y | 0.1573 | likely_benign | 0.226 | benign | 0.23 | Stabilizing | 0.968 | D | 0.349 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.