Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7422 | 22489;22490;22491 | chr2:178722523;178722522;178722521 | chr2:179587250;179587249;179587248 |
N2AB | 7105 | 21538;21539;21540 | chr2:178722523;178722522;178722521 | chr2:179587250;179587249;179587248 |
N2A | 6178 | 18757;18758;18759 | chr2:178722523;178722522;178722521 | chr2:179587250;179587249;179587248 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.026 | N | 0.189 | 0.276 | 0.293147016451 | gnomAD-4.0.0 | 1.37003E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80056E-06 | 0 | 0 |
A/S | None | None | 0.233 | N | 0.443 | 0.224 | 0.200317383148 | gnomAD-4.0.0 | 6.85015E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00278E-07 | 0 | 0 |
A/T | rs2078575332 | None | 0.069 | N | 0.099 | 0.271 | 0.19670166235 | gnomAD-4.0.0 | 1.37003E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80056E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6676 | likely_pathogenic | 0.5965 | pathogenic | -0.721 | Destabilizing | 1.0 | D | 0.457 | neutral | None | None | None | None | N |
A/D | 0.5246 | ambiguous | 0.3882 | ambiguous | -0.741 | Destabilizing | 0.995 | D | 0.443 | neutral | None | None | None | None | N |
A/E | 0.4624 | ambiguous | 0.3438 | ambiguous | -0.855 | Destabilizing | 0.983 | D | 0.409 | neutral | N | 0.465543686 | None | None | N |
A/F | 0.4229 | ambiguous | 0.3547 | ambiguous | -0.986 | Destabilizing | 1.0 | D | 0.473 | neutral | None | None | None | None | N |
A/G | 0.1862 | likely_benign | 0.1647 | benign | -0.762 | Destabilizing | 0.797 | D | 0.397 | neutral | N | 0.493036617 | None | None | N |
A/H | 0.6035 | likely_pathogenic | 0.5247 | ambiguous | -0.797 | Destabilizing | 1.0 | D | 0.466 | neutral | None | None | None | None | N |
A/I | 0.2739 | likely_benign | 0.2279 | benign | -0.409 | Destabilizing | 0.997 | D | 0.423 | neutral | None | None | None | None | N |
A/K | 0.686 | likely_pathogenic | 0.5871 | pathogenic | -0.952 | Destabilizing | 0.995 | D | 0.406 | neutral | None | None | None | None | N |
A/L | 0.211 | likely_benign | 0.1799 | benign | -0.409 | Destabilizing | 0.99 | D | 0.396 | neutral | None | None | None | None | N |
A/M | 0.306 | likely_benign | 0.2712 | benign | -0.329 | Destabilizing | 1.0 | D | 0.426 | neutral | None | None | None | None | N |
A/N | 0.3572 | ambiguous | 0.3036 | benign | -0.552 | Destabilizing | 0.957 | D | 0.471 | neutral | None | None | None | None | N |
A/P | 0.3445 | ambiguous | 0.2774 | benign | -0.44 | Destabilizing | 0.026 | N | 0.189 | neutral | N | 0.487113824 | None | None | N |
A/Q | 0.4506 | ambiguous | 0.3813 | ambiguous | -0.817 | Destabilizing | 1.0 | D | 0.459 | neutral | None | None | None | None | N |
A/R | 0.5651 | likely_pathogenic | 0.4733 | ambiguous | -0.46 | Destabilizing | 0.999 | D | 0.451 | neutral | None | None | None | None | N |
A/S | 0.0933 | likely_benign | 0.0864 | benign | -0.821 | Destabilizing | 0.233 | N | 0.443 | neutral | N | 0.428025448 | None | None | N |
A/T | 0.1028 | likely_benign | 0.0856 | benign | -0.852 | Destabilizing | 0.069 | N | 0.099 | neutral | N | 0.379732856 | None | None | N |
A/V | 0.1508 | likely_benign | 0.1213 | benign | -0.44 | Destabilizing | 0.965 | D | 0.397 | neutral | N | 0.441725464 | None | None | N |
A/W | 0.8151 | likely_pathogenic | 0.7556 | pathogenic | -1.183 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
A/Y | 0.5902 | likely_pathogenic | 0.5213 | ambiguous | -0.832 | Destabilizing | 1.0 | D | 0.473 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.