Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7433 | 22522;22523;22524 | chr2:178722490;178722489;178722488 | chr2:179587217;179587216;179587215 |
N2AB | 7116 | 21571;21572;21573 | chr2:178722490;178722489;178722488 | chr2:179587217;179587216;179587215 |
N2A | 6189 | 18790;18791;18792 | chr2:178722490;178722489;178722488 | chr2:179587217;179587216;179587215 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs2078568600 | None | 1.0 | D | 0.841 | 0.665 | 0.872161657467 | gnomAD-4.0.0 | 1.59222E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8601E-06 | 0 | 0 |
G/V | rs1362341150 | -0.336 | 1.0 | D | 0.834 | 0.763 | 0.950427629675 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.665E-04 |
G/V | rs1362341150 | -0.336 | 1.0 | D | 0.834 | 0.763 | 0.950427629675 | gnomAD-4.0.0 | 1.36875E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.31411E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.5219 | ambiguous | 0.4631 | ambiguous | -0.482 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | D | 0.602234654 | None | None | I |
G/C | 0.7595 | likely_pathogenic | 0.706 | pathogenic | -0.917 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
G/D | 0.4989 | ambiguous | 0.435 | ambiguous | -0.847 | Destabilizing | 0.966 | D | 0.571 | neutral | None | None | None | None | I |
G/E | 0.6069 | likely_pathogenic | 0.5379 | ambiguous | -1.001 | Destabilizing | 1.0 | D | 0.83 | deleterious | D | 0.607786964 | None | None | I |
G/F | 0.905 | likely_pathogenic | 0.8804 | pathogenic | -1.1 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
G/H | 0.7776 | likely_pathogenic | 0.7474 | pathogenic | -0.76 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
G/I | 0.9136 | likely_pathogenic | 0.874 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
G/K | 0.8608 | likely_pathogenic | 0.8243 | pathogenic | -1.05 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
G/L | 0.8579 | likely_pathogenic | 0.8178 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
G/M | 0.9083 | likely_pathogenic | 0.88 | pathogenic | -0.448 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
G/N | 0.5379 | ambiguous | 0.4966 | ambiguous | -0.676 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
G/P | 0.9891 | likely_pathogenic | 0.9826 | pathogenic | -0.473 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
G/Q | 0.7268 | likely_pathogenic | 0.6873 | pathogenic | -0.989 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
G/R | 0.7395 | likely_pathogenic | 0.7018 | pathogenic | -0.549 | Destabilizing | 1.0 | D | 0.841 | deleterious | D | 0.602668623 | None | None | I |
G/S | 0.2497 | likely_benign | 0.239 | benign | -0.832 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
G/T | 0.6408 | likely_pathogenic | 0.5881 | pathogenic | -0.922 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
G/V | 0.8434 | likely_pathogenic | 0.7862 | pathogenic | -0.473 | Destabilizing | 1.0 | D | 0.834 | deleterious | D | 0.660447261 | None | None | I |
G/W | 0.848 | likely_pathogenic | 0.8366 | pathogenic | -1.263 | Destabilizing | 1.0 | D | 0.819 | deleterious | D | 0.644629705 | None | None | I |
G/Y | 0.8377 | likely_pathogenic | 0.7983 | pathogenic | -0.928 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.