Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7437 | 22534;22535;22536 | chr2:178722478;178722477;178722476 | chr2:179587205;179587204;179587203 |
N2AB | 7120 | 21583;21584;21585 | chr2:178722478;178722477;178722476 | chr2:179587205;179587204;179587203 |
N2A | 6193 | 18802;18803;18804 | chr2:178722478;178722477;178722476 | chr2:179587205;179587204;179587203 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1163896021 | 0.157 | 0.642 | N | 0.451 | 0.183 | 0.447213685739 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1163896021 | 0.157 | 0.642 | N | 0.451 | 0.183 | 0.447213685739 | gnomAD-4.0.0 | 6.84371E-07 | None | None | None | None | N | None | 0 | 2.23644E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/K | None | None | 0.001 | N | 0.259 | 0.269 | 0.351830644314 | gnomAD-4.0.0 | 6.84371E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65717E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0899 | likely_benign | 0.0977 | benign | -0.622 | Destabilizing | 0.139 | N | 0.323 | neutral | N | 0.505987586 | None | None | N |
T/C | 0.4861 | ambiguous | 0.4971 | ambiguous | -0.464 | Destabilizing | 0.995 | D | 0.451 | neutral | None | None | None | None | N |
T/D | 0.3758 | ambiguous | 0.4215 | ambiguous | 0.252 | Stabilizing | 0.495 | N | 0.417 | neutral | None | None | None | None | N |
T/E | 0.2639 | likely_benign | 0.3081 | benign | 0.277 | Stabilizing | 0.329 | N | 0.352 | neutral | None | None | None | None | N |
T/F | 0.1895 | likely_benign | 0.2056 | benign | -0.697 | Destabilizing | 0.007 | N | 0.364 | neutral | None | None | None | None | N |
T/G | 0.3368 | likely_benign | 0.3739 | ambiguous | -0.889 | Destabilizing | 0.495 | N | 0.383 | neutral | None | None | None | None | N |
T/H | 0.2308 | likely_benign | 0.2528 | benign | -1.074 | Destabilizing | 0.944 | D | 0.498 | neutral | None | None | None | None | N |
T/I | 0.116 | likely_benign | 0.1198 | benign | -0.005 | Destabilizing | 0.642 | D | 0.451 | neutral | N | 0.509817325 | None | None | N |
T/K | 0.2067 | likely_benign | 0.2578 | benign | -0.443 | Destabilizing | 0.001 | N | 0.259 | neutral | N | 0.495423876 | None | None | N |
T/L | 0.087 | likely_benign | 0.0912 | benign | -0.005 | Destabilizing | 0.329 | N | 0.373 | neutral | None | None | None | None | N |
T/M | 0.0768 | likely_benign | 0.0786 | benign | -0.013 | Destabilizing | 0.981 | D | 0.465 | neutral | None | None | None | None | N |
T/N | 0.1204 | likely_benign | 0.1317 | benign | -0.493 | Destabilizing | 0.495 | N | 0.401 | neutral | None | None | None | None | N |
T/P | 0.289 | likely_benign | 0.2987 | benign | -0.177 | Destabilizing | 0.784 | D | 0.457 | neutral | D | 0.533639673 | None | None | N |
T/Q | 0.1939 | likely_benign | 0.229 | benign | -0.538 | Destabilizing | 0.085 | N | 0.263 | neutral | None | None | None | None | N |
T/R | 0.1735 | likely_benign | 0.2093 | benign | -0.319 | Destabilizing | 0.002 | N | 0.258 | neutral | N | 0.487977828 | None | None | N |
T/S | 0.1127 | likely_benign | 0.1249 | benign | -0.803 | Destabilizing | 0.029 | N | 0.269 | neutral | N | 0.519031454 | None | None | N |
T/V | 0.1087 | likely_benign | 0.1118 | benign | -0.177 | Destabilizing | 0.495 | N | 0.372 | neutral | None | None | None | None | N |
T/W | 0.5486 | ambiguous | 0.5756 | pathogenic | -0.683 | Destabilizing | 0.995 | D | 0.498 | neutral | None | None | None | None | N |
T/Y | 0.2464 | likely_benign | 0.2536 | benign | -0.4 | Destabilizing | 0.543 | D | 0.528 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.