Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7445 | 22558;22559;22560 | chr2:178722454;178722453;178722452 | chr2:179587181;179587180;179587179 |
N2AB | 7128 | 21607;21608;21609 | chr2:178722454;178722453;178722452 | chr2:179587181;179587180;179587179 |
N2A | 6201 | 18826;18827;18828 | chr2:178722454;178722453;178722452 | chr2:179587181;179587180;179587179 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.2 | N | 0.276 | 0.175 | 0.186928172975 | gnomAD-4.0.0 | 1.59199E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1938 | likely_benign | 0.176 | benign | -0.08 | Destabilizing | 0.136 | N | 0.239 | neutral | N | 0.495403247 | None | None | I |
S/C | 0.5073 | ambiguous | 0.4604 | ambiguous | -0.369 | Destabilizing | 1.0 | D | 0.541 | neutral | N | 0.512661809 | None | None | I |
S/D | 0.7444 | likely_pathogenic | 0.7357 | pathogenic | 0.066 | Stabilizing | 0.998 | D | 0.488 | neutral | None | None | None | None | I |
S/E | 0.8956 | likely_pathogenic | 0.8669 | pathogenic | -0.024 | Destabilizing | 0.998 | D | 0.498 | neutral | None | None | None | None | I |
S/F | 0.5473 | ambiguous | 0.5086 | ambiguous | -0.784 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | N | 0.494468649 | None | None | I |
S/G | 0.2212 | likely_benign | 0.221 | benign | -0.15 | Destabilizing | 0.997 | D | 0.453 | neutral | None | None | None | None | I |
S/H | 0.7799 | likely_pathogenic | 0.7561 | pathogenic | -0.417 | Destabilizing | 1.0 | D | 0.539 | neutral | None | None | None | None | I |
S/I | 0.6325 | likely_pathogenic | 0.5297 | ambiguous | -0.029 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
S/K | 0.9563 | likely_pathogenic | 0.9433 | pathogenic | -0.335 | Destabilizing | 0.999 | D | 0.494 | neutral | None | None | None | None | I |
S/L | 0.3093 | likely_benign | 0.2639 | benign | -0.029 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
S/M | 0.5518 | ambiguous | 0.4954 | ambiguous | -0.183 | Destabilizing | 1.0 | D | 0.53 | neutral | None | None | None | None | I |
S/N | 0.4346 | ambiguous | 0.4248 | ambiguous | -0.09 | Destabilizing | 0.98 | D | 0.519 | neutral | None | None | None | None | I |
S/P | 0.8412 | likely_pathogenic | 0.7934 | pathogenic | -0.02 | Destabilizing | 0.999 | D | 0.534 | neutral | N | 0.517434749 | None | None | I |
S/Q | 0.8849 | likely_pathogenic | 0.8587 | pathogenic | -0.282 | Destabilizing | 1.0 | D | 0.475 | neutral | None | None | None | None | I |
S/R | 0.9227 | likely_pathogenic | 0.9093 | pathogenic | -0.074 | Destabilizing | 1.0 | D | 0.532 | neutral | None | None | None | None | I |
S/T | 0.1537 | likely_benign | 0.1412 | benign | -0.173 | Destabilizing | 0.2 | N | 0.276 | neutral | N | 0.517858018 | None | None | I |
S/V | 0.595 | likely_pathogenic | 0.5004 | ambiguous | -0.02 | Destabilizing | 0.997 | D | 0.629 | neutral | None | None | None | None | I |
S/W | 0.7454 | likely_pathogenic | 0.7112 | pathogenic | -0.899 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
S/Y | 0.5672 | likely_pathogenic | 0.5163 | ambiguous | -0.557 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.490683214 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.