Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7447 | 22564;22565;22566 | chr2:178722448;178722447;178722446 | chr2:179587175;179587174;179587173 |
N2AB | 7130 | 21613;21614;21615 | chr2:178722448;178722447;178722446 | chr2:179587175;179587174;179587173 |
N2A | 6203 | 18832;18833;18834 | chr2:178722448;178722447;178722446 | chr2:179587175;179587174;179587173 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs749750693 | 0.027 | 0.999 | N | 0.625 | 0.46 | 0.493628743246 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 9.96E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs749750693 | 0.027 | 0.999 | N | 0.625 | 0.46 | 0.493628743246 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 2.88018E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs749750693 | 0.027 | 0.999 | N | 0.625 | 0.46 | 0.493628743246 | gnomAD-4.0.0 | 2.47938E-06 | None | None | None | None | I | None | 0 | 0 | None | 1.01392E-04 | 0 | None | 0 | 0 | 8.47781E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.254 | likely_benign | 0.201 | benign | -0.375 | Destabilizing | 0.987 | D | 0.645 | neutral | N | 0.482881626 | None | None | I |
P/C | 0.8981 | likely_pathogenic | 0.8997 | pathogenic | -0.621 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
P/D | 0.6262 | likely_pathogenic | 0.6338 | pathogenic | -0.353 | Destabilizing | 0.988 | D | 0.624 | neutral | None | None | None | None | I |
P/E | 0.5636 | ambiguous | 0.5308 | ambiguous | -0.474 | Destabilizing | 0.95 | D | 0.632 | neutral | None | None | None | None | I |
P/F | 0.8709 | likely_pathogenic | 0.8538 | pathogenic | -0.685 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
P/G | 0.6103 | likely_pathogenic | 0.633 | pathogenic | -0.478 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | I |
P/H | 0.5468 | ambiguous | 0.5015 | ambiguous | -0.091 | Destabilizing | 1.0 | D | 0.655 | neutral | D | 0.538475065 | None | None | I |
P/I | 0.7653 | likely_pathogenic | 0.7196 | pathogenic | -0.256 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
P/K | 0.7078 | likely_pathogenic | 0.6526 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | I |
P/L | 0.4569 | ambiguous | 0.3804 | ambiguous | -0.256 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.499037325 | None | None | I |
P/M | 0.7471 | likely_pathogenic | 0.6992 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | I |
P/N | 0.5884 | likely_pathogenic | 0.6005 | pathogenic | -0.153 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | I |
P/Q | 0.4815 | ambiguous | 0.4207 | ambiguous | -0.396 | Destabilizing | 0.989 | D | 0.527 | neutral | None | None | None | None | I |
P/R | 0.5136 | ambiguous | 0.4373 | ambiguous | 0.084 | Stabilizing | 1.0 | D | 0.659 | neutral | N | 0.489326861 | None | None | I |
P/S | 0.3504 | ambiguous | 0.3145 | benign | -0.464 | Destabilizing | 0.999 | D | 0.625 | neutral | N | 0.494162253 | None | None | I |
P/T | 0.3553 | ambiguous | 0.315 | benign | -0.488 | Destabilizing | 0.999 | D | 0.635 | neutral | N | 0.482121158 | None | None | I |
P/V | 0.5851 | likely_pathogenic | 0.5296 | ambiguous | -0.263 | Destabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | I |
P/W | 0.9439 | likely_pathogenic | 0.9415 | pathogenic | -0.77 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
P/Y | 0.8382 | likely_pathogenic | 0.8271 | pathogenic | -0.47 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.